Polycladomyces abyssicola: JIR001_30520
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Entry
JIR001_30520 CDS
T07192
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00260
Glycine, serine and threonine metabolism
pabs00460
Cyanoamino acid metabolism
pabs00630
Glyoxylate and dicarboxylate metabolism
pabs00670
One carbon pool by folate
pabs00680
Methane metabolism
pabs01100
Metabolic pathways
pabs01110
Biosynthesis of secondary metabolites
pabs01120
Microbial metabolism in diverse environments
pabs01200
Carbon metabolism
pabs01230
Biosynthesis of amino acids
pabs01240
Biosynthesis of cofactors
pabs04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JIR001_30520 (glyA)
09102 Energy metabolism
00680 Methane metabolism
JIR001_30520 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JIR001_30520 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JIR001_30520 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JIR001_30520 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JIR001_30520 (glyA)
Enzymes [BR:
pabs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JIR001_30520 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
BCU83269
UniProt:
A0A8D5UHJ0
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Position
complement(3049704..3050954)
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AA seq
416 aa
AA seq
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MLNHIRQTDPETAEAIASELSRQQQKIELIASENFVSRAVLEALGTVLTNKYAEGYPGKR
YYGGCEYVDIVEDLARERAKKLFGAEHANVQPHSGAQANMAVYFSVLEPGDTVLGMNLAH
GGHLTHGSPVNFSGKLYKFVAYGVDPETHRIDYEEVRRLALEHKPKLLVAGASAYPRTID
FAKLREIADEAGCLLMVDMAHIAGLVATGHHPNPVPYADFVTTTTHKTLRGPRGGMILCK
EKYAKQIDKSIFPGIQGGPLMHVIAAKAVAFAEALSDSFKDYSARVVNNASRLAQALIER
GFQLISGGTDNHLILIDVRNLNLTGKQAEFLLDEVGITVNKNAIPFDPESPFVTSGIRIG
TPAVTTRGMDEEAMEEIADIMSLVLKNPDDAQAQEQARQRVARLTDKFPLYPDLKV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaatcatattcggcaaacagacccggaaacggcggaagccatcgcaagcgagttg
tcccgtcaacaacaaaaaattgaactgattgcgtctgaaaactttgtcagccgtgccgtg
ctagaagcgttgggaaccgtgctgaccaacaaatacgctgaaggttatcccggaaaacgg
tactatggcggctgtgaatatgtggacattgtggaagacctggcccgggagcgggcaaaa
aagctgttcggtgcggaacatgccaatgtgcaaccgcactcgggtgcacaagccaacatg
gctgtttatttctccgtgttggaacccggcgatacagtgttgggaatgaacttggctcac
ggcggccatcttacccatggtagtccggtcaacttttccggaaagttgtacaaatttgtc
gcctatggggttgatcccgaaacgcatcggatcgattatgaagaagtgcgtcgcttggcc
ctcgaacacaaaccgaaattgctcgtcgccggcgccagcgcctatccgcggacgatcgat
ttcgccaagctgcgggagatcgccgatgaagcaggttgcctgctgatggtcgatatggcg
cacatcgctggtctggtggcgacgggacatcatcccaacccggttccgtatgccgatttc
gtcacaaccaccacgcacaaaacgttgcgcggtcctcggggcggtatgattttgtgcaag
gagaaatacgccaaacagattgataagtcgatcttccccggcattcaaggcggtccgttg
atgcatgtgatcgcggccaaggcggtggcttttgccgaggcactttccgattcgttcaaa
gactactcggccagggttgtcaacaatgcgtcccgtttggcgcaagcgttgatcgaacgc
ggattccaactgatttccggcggcacggacaaccacttgatcctgattgatgtccgcaac
ttaaacctgaccgggaaacaggcggaattcctcctggacgaagtggggatcaccgtcaac
aaaaacgccatccccttcgatccggagagtccgtttgtcaccagtggtatccggatcggt
acaccggcggtaacgacacggggaatggatgaggaagcgatggaggaaatcgccgatatc
atgtcgttggtcctgaaaaatccggatgacgcccaagcgcaggaacaagcgcgtcagcgt
gtggcacgtttgacagataaattcccattgtatccggacttgaaggtgtaa
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