KEGG   Polycladomyces abyssicola: JIR001_31230
Entry
JIR001_31230      CDS       T07192                                 
Name
(GenBank) hypothetical protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
pabs  Polycladomyces abyssicola
Pathway
pabs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pabs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    JIR001_31230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pabs03400]
    JIR001_31230
DNA repair and recombination proteins [BR:pabs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     JIR001_31230
SSDB
Motif
Pfam: MutS_V
Other DBs
NCBI-ProteinID: BCU83340
UniProt: A0A8D5ZP24
LinkDB
Position
complement(3117484..3119100)
AA seq 538 aa
MWMDEKTGQALSWPEIWSLFQPITPFGQRAKRSLAPFVPGQEAAWQESLQELEGLMNTAR
QPEWREAVEACLRHLPDVEPIFYRLERGEVPGLSEWFQLKQWLWHMHRWAKCLIRQSLHE
WISPGDVNRIEACLHKLDPRPQLGPAFRLDDSFDPELADLRRRREACERNIREYREALAR
EIEQLTGVCRNREGEWVVDRRSPEATKLSAMNALTPVRETPFDVVYHAKPTLQEQQWMAE
QERIDERIKEVEAAVLARLAAALRPDIPLMLDWLASVTRFDLQWARLRLAERWNGSRPRR
SDGPIRLKGAVHPVLAERLAEHGYTFTPLDLEVKRGVTVIIGPNMGGKTVAMKTLGVVVA
LAHYGFFVPAKICELPLIPFLAGMIGDDQDAEAGLSTFGAEMTRLGVLLRRRPGGLLLLD
EVGRGTNPAEGAALSTAVTAHLACGEHWAVHVTHHHEVLEVTGIRGYRTAGWKRPPDTSA
FHRTENWREWIDYRLMPLEAGDEIPCQATVVARLMGMPEAVVRDAERRLVSQRKKSTR
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgtggatggatgagaagaccgggcaggcgctgtcgtggccggaaatctggtccctgttt
caaccgattacgccgtttggtcaacgggccaagcgatcgttggcaccgtttgttcccgga
caggaagcggcatggcaggagtcccttcaggaattggaggggttgatgaatacggctcgt
cagcccgaatggcgggaagcagtggaagcatgtttgcggcatctacctgatgtagaaccg
atcttctaccgattggaacgtggggaggtgccgggtctctccgaatggtttcaactcaag
cagtggttgtggcatatgcatcggtgggcgaaatgcttgatccgacagtcattgcatgag
tggatttcccccggtgacgtcaaccggatcgaagcgtgtttgcacaaactcgatccccgt
cctcaacttgggcccgcattccggttggatgactcgtttgatccggagttggccgatttg
cgccgtcgccgggaggcatgtgagcgaaacattcgcgagtaccgggaggcattggcgagg
gagatcgaacagttgacgggagtttgccgcaatcgtgaaggcgaatgggtggtggatcgt
cggtcgcccgaagcgaccaagttgtcggcgatgaatgcattgactcccgtgcgggaaacg
ccgtttgacgtcgtataccatgccaagcccacgcttcaagagcagcaatggatggcggaa
caggagcgaatcgatgagcgcatcaaagaagtggaggcagccgtcttggcgcggctggct
gctgcacttcgtccggacataccactcatgctggattggctggcatccgttacacggttt
gacctgcagtgggcccggttgcgtctggccgagcggtggaatggtagtagaccacgccga
tccgacggcccgatccggttaaaaggggcggttcaccctgtgttggcggagcgtctggct
gaacatggatacacattcactccgctggatctggaggtaaagcgtggtgtcactgtcatc
atcgggcccaacatgggcgggaaaacggtggcgatgaaaacgctgggtgtcgtggtggcc
ctggcccattacggtttcttcgtaccggcaaaaatctgcgagcttccgctcattcctttc
ctcgccggcatgatcggtgatgaccaggatgcggaagccggattgagcacattcggcgca
gagatgacacgtttgggggtattgttgagacgccgccccggcgggttgctccttttggac
gaggtgggcaggggcaccaacccggcggagggagcagcattgtctacggcagtaaccgcc
catttggcatgcggggagcactgggcggtccatgtgacacatcaccatgaggtattggaa
gtgacgggcatccgcggttatcggacggcggggtggaaacgtccacctgacacatctgcg
ttccatcgaaccgaaaattggcgggaatggattgactaccgattgatgccgctggaggcg
ggggatgagattccatgtcaagcgacggtggtggcccggttgatgggtatgccggaggcg
gttgtgcgggacgcagagcggagattggtttctcaaagaaagaaatcaacccggtga

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