Polycladomyces abyssicola: JIR001_31230
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Entry
JIR001_31230 CDS
T07192
Name
(GenBank) hypothetical protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JIR001_31230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pabs03400
]
JIR001_31230
DNA repair and recombination proteins [BR:
pabs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JIR001_31230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Motif
Other DBs
NCBI-ProteinID:
BCU83340
UniProt:
A0A8D5ZP24
LinkDB
All DBs
Position
complement(3117484..3119100)
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AA seq
538 aa
AA seq
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MWMDEKTGQALSWPEIWSLFQPITPFGQRAKRSLAPFVPGQEAAWQESLQELEGLMNTAR
QPEWREAVEACLRHLPDVEPIFYRLERGEVPGLSEWFQLKQWLWHMHRWAKCLIRQSLHE
WISPGDVNRIEACLHKLDPRPQLGPAFRLDDSFDPELADLRRRREACERNIREYREALAR
EIEQLTGVCRNREGEWVVDRRSPEATKLSAMNALTPVRETPFDVVYHAKPTLQEQQWMAE
QERIDERIKEVEAAVLARLAAALRPDIPLMLDWLASVTRFDLQWARLRLAERWNGSRPRR
SDGPIRLKGAVHPVLAERLAEHGYTFTPLDLEVKRGVTVIIGPNMGGKTVAMKTLGVVVA
LAHYGFFVPAKICELPLIPFLAGMIGDDQDAEAGLSTFGAEMTRLGVLLRRRPGGLLLLD
EVGRGTNPAEGAALSTAVTAHLACGEHWAVHVTHHHEVLEVTGIRGYRTAGWKRPPDTSA
FHRTENWREWIDYRLMPLEAGDEIPCQATVVARLMGMPEAVVRDAERRLVSQRKKSTR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtggatggatgagaagaccgggcaggcgctgtcgtggccggaaatctggtccctgttt
caaccgattacgccgtttggtcaacgggccaagcgatcgttggcaccgtttgttcccgga
caggaagcggcatggcaggagtcccttcaggaattggaggggttgatgaatacggctcgt
cagcccgaatggcgggaagcagtggaagcatgtttgcggcatctacctgatgtagaaccg
atcttctaccgattggaacgtggggaggtgccgggtctctccgaatggtttcaactcaag
cagtggttgtggcatatgcatcggtgggcgaaatgcttgatccgacagtcattgcatgag
tggatttcccccggtgacgtcaaccggatcgaagcgtgtttgcacaaactcgatccccgt
cctcaacttgggcccgcattccggttggatgactcgtttgatccggagttggccgatttg
cgccgtcgccgggaggcatgtgagcgaaacattcgcgagtaccgggaggcattggcgagg
gagatcgaacagttgacgggagtttgccgcaatcgtgaaggcgaatgggtggtggatcgt
cggtcgcccgaagcgaccaagttgtcggcgatgaatgcattgactcccgtgcgggaaacg
ccgtttgacgtcgtataccatgccaagcccacgcttcaagagcagcaatggatggcggaa
caggagcgaatcgatgagcgcatcaaagaagtggaggcagccgtcttggcgcggctggct
gctgcacttcgtccggacataccactcatgctggattggctggcatccgttacacggttt
gacctgcagtgggcccggttgcgtctggccgagcggtggaatggtagtagaccacgccga
tccgacggcccgatccggttaaaaggggcggttcaccctgtgttggcggagcgtctggct
gaacatggatacacattcactccgctggatctggaggtaaagcgtggtgtcactgtcatc
atcgggcccaacatgggcgggaaaacggtggcgatgaaaacgctgggtgtcgtggtggcc
ctggcccattacggtttcttcgtaccggcaaaaatctgcgagcttccgctcattcctttc
ctcgccggcatgatcggtgatgaccaggatgcggaagccggattgagcacattcggcgca
gagatgacacgtttgggggtattgttgagacgccgccccggcgggttgctccttttggac
gaggtgggcaggggcaccaacccggcggagggagcagcattgtctacggcagtaaccgcc
catttggcatgcggggagcactgggcggtccatgtgacacatcaccatgaggtattggaa
gtgacgggcatccgcggttatcggacggcggggtggaaacgtccacctgacacatctgcg
ttccatcgaaccgaaaattggcgggaatggattgactaccgattgatgccgctggaggcg
ggggatgagattccatgtcaagcgacggtggtggcccggttgatgggtatgccggaggcg
gttgtgcgggacgcagagcggagattggtttctcaaagaaagaaatcaacccggtga
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