Polycladomyces abyssicola: JIR001_31270
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Entry
JIR001_31270 CDS
T07192
Symbol
rocR
Name
(GenBank) arginine utilization regulatory protein
KO
K06714
arginine utilization regulatory protein
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pabs03000
]
JIR001_31270 (rocR)
Transcription factors [BR:
pabs03000
]
Prokaryotic type
Helix-turn-helix
Other families
JIR001_31270 (rocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_4
AAA_5
PAS_9
HTH_30
AAA_2
Mg_chelatase
PAS
AAA_7
MCM
HTH_psq
AAA
AAA_16
HTH_50
bpMoxR
HTH_20
PriA_C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BCU83344
UniProt:
A0A8D5UHN8
LinkDB
All DBs
Position
complement(3122883..3124292)
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AA seq
469 aa
AA seq
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MTHGAMSEKMMHEVLRCIDEGIHVVGLDGITLFYNPVAARLDGMDVEEVIGMHVLDTFPS
LTRKTSTLLKVIDTGQPIYNQQQTYHNRYGKRIVTINTTLPLRVNGHLVGAVEVSKDITR
IKELSETVIELQTQIREPSRRRASKIRQRYRFEQILTQDERMMREISRAKKAAATDSPVL
VVGETGTGKELMVQSIHHASPRGKHPLIAQNCAAIPSALLEGILFGTAKGAFTGAEDRPG
LFELADGGTIFLDEIHVMPLDLQAKLLRVLEEGVVRRVGDTRVRPVDVRILAATNEDPLE
SIKEGRLRKDLYYRVHVVRITLPPLRERREDLPLLTDHFIRKYNDRLGTDVIGVAPEVER
LFARYDWPGNVRELEHTIEGAMNVLEGKVIGLEHLPPHMLEGADDTPLVDDVQWESGQSL
REVLAQVEERLIRRAVADCRGNMVQAAKRLGIPRQTLQYKVKKLGIERP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatggggcgatgtcggaaaagatgatgcacgaggtgttgcgttgtatcgatgaa
ggtattcatgtggtgggactggacgggattacgctgttttacaaccccgtagccgcccgg
ttggacggaatggatgtcgaggaagtgatcggcatgcacgtactggacactttcccttcg
ttgacgcgaaaaacgagtactctgttgaaagtgatcgataccggccaaccgatctacaat
cagcaacaaacgtaccacaatcgctacgggaagcggatcgtgacgatcaacacgacattg
ccgttgcgcgtcaacgggcatctggttggcgcggtcgaggtatcgaaagacatcacgcgc
atcaaagaactgtctgaaaccgtcatcgaattgcaaacgcaaatccgcgaacccagccgt
cgtcgagcgtccaagatacgtcagcgataccggtttgagcagattttgacgcaagatgag
cggatgatgcgggaaatctcgcgtgcgaaaaaagcggcggcgactgattctcccgttttg
gtcgtgggtgagaccggtaccggaaaagagttgatggtccagtccatccatcatgcgtcc
ccaaggggaaaacatcccttgatcgcacaaaactgtgcagcgattccatccgctttgttg
gaagggattttgttcggcacggcgaagggagcgtttaccggtgcggaagatcgtccggga
ttgtttgagttggctgacggcggaacgatatttttggatgagattcatgtgatgccgttg
gatttgcaggccaagttgcttcgggtgctggaagaaggtgttgtgcggcgagtgggagat
acccgcgtgcgtccggtggatgtgcgtatattggcggcaaccaatgaagatccgctggaa
agcatcaaggaagggcgtctgcgcaaagacctgtattatcgggtacatgtggtgcgtatt
accctgccgccgctgcgcgaacggcgggaggatctcccgttgttgaccgatcattttatt
cgcaagtacaacgatcggttgggtaccgacgtgatcggagttgcaccggaggtggaacgc
ctttttgcccgatatgattggccgggtaacgtacgggagctggagcacacgattgaaggt
gcaatgaacgtgctggaggggaaggtgatcggtttggaacaccttccgccgcatatgctg
gagggggcggatgacaccccgctcgttgacgatgtgcagtgggagtcgggacagtctttg
cgtgaggtactggcacaggtggaagagcggttgattcgccgagccgtggcggattgtcgg
ggaaatatggtgcaagcggccaaaaggctggggattccgcgtcagacgttgcagtacaag
gtaaaaaagctggggattgaacggccataa
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