Polycladomyces abyssicola: JIR001_31460
Help
Entry
JIR001_31460 CDS
T07192
Symbol
oppA_5
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs01501
beta-Lactam resistance
pabs02010
ABC transporters
pabs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JIR001_31460 (oppA_5)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JIR001_31460 (oppA_5)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JIR001_31460 (oppA_5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pabs02000
]
JIR001_31460 (oppA_5)
Transporters [BR:
pabs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
JIR001_31460 (oppA_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BCU83363
UniProt:
A0A8D5UJX3
LinkDB
All DBs
Position
complement(3141972..3143585)
Genome browser
AA seq
537 aa
AA seq
DB search
MAAILTAMSLLLSACDSLLPQVSSQNRIHPEKQVLNLTVNEEPATLDSAVAIDPHSVNLL
NNVMEGLMRLGKDNKPEPAIAQQVEVSADKRVYTFHLREARWSDGKPVRADDFAYAWQRV
LHPQTHSRSAYLFFPIQGAQDYHRGRIGWKQVGIRVVDEQTLRITLTRPIPYFLGLTTTS
AYLPQRADIVERLGRSYGKNAAELVYDGPFRISGWERGKSIILTRNEQYWDKGEVFLETV
RAAVVRDTAEGIQLYHTNQTDTARVDQIYADLYKKTSDWKEQPTASVQFLQFNLQNPLFR
NPHIRKAFSYAIDREALTDDLLKDGSMPASSVIPPAILPINERSGEIVEKRPELHRFDPQ
LAHEWLRKGMNDLNLKRFPEEVVMTVPDTDKQVALFLQNQFRRNLGVEVKIDPKPLRGFP
QQLDRGEFDIAINEWRASYRDPGGVLVAFSTEGPCNPGKWSASEYDRWLEQAASTADEEK
RIGLYLKAEKKLLEDAVISPLDFQSEAFIQRKWVKNMVRHPFGADLTLKEAFIEGKK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgatattgacagccatgagtttgctgttgagcgcctgtgacagccttctgccc
caggtttcctcacagaaccggattcatccagagaagcaggtgttgaatctgaccgtcaac
gaagaacctgcgacattggacagtgccgtcgcaatcgatccgcattccgtcaacttgctc
aacaatgtaatggaggggttgatgcggctgggcaaagacaacaaaccggaacccgccatc
gcccagcaggtggaagtgagtgcggacaagcgcgtgtacacatttcatctcagggaagca
cgctggagtgacggcaagccagtgcgggccgatgatttcgcctatgcgtggcagcgggta
ctacacccccaaacccattctcggtcggcgtatctgttttttcccattcaaggagcacag
gattaccaccgcggtcggatcggttggaaacaggtgggcattcgggtggtcgacgagcaa
acgcttcgtattacgctgacccgtccgatcccgtattttttggggctgacaacgacatcc
gcctatttgccgcaacgggcggacatcgtggagcggttgggtagaagttacggcaaaaat
gctgcggagttggtatatgacggtccgttccgcatttccggatgggagcggggaaaaagt
atcatactcacccggaacgagcagtactgggacaagggggaggtgtttttggaaacggtc
agggctgctgtcgttcgtgacacggccgaagggattcaactctaccatacaaatcaaacc
gatacagcccgggtggatcaaatctatgccgatctgtacaaaaagacttccgattggaag
gagcaacccacagccagcgtacaattcctccagttcaatctgcaaaatccattgtttcgc
aatccccatattcggaaagcattcagctatgcgattgaccgtgaggcattaaccgatgac
ctgctgaaggatggttcaatgccggccagctccgtcattccacctgccattttgcccatc
aacgaacgatccggagaaatagttgaaaaacggccggaattgcatcggttcgatccccag
ctggcacatgaatggttaagaaaaggcatgaatgatctgaacctcaagcgttttcccgaa
gaagtggtaatgacggtgccggatacagacaaacaagtggcgttgtttttgcagaatcaa
tttcgccgcaatctgggggtggaagtcaaaatcgatcccaagccgcttcgcggttttcct
caacagttggatcgcggagaatttgatatcgcaatcaacgagtggcgtgctagctatcgt
gacccgggtggagtactggtggctttctctacggagggaccgtgtaatcccggcaaatgg
tccgcttcggaatatgatcgatggttggaacaagcagcaagcacagcggatgaagagaag
cggatcggtctctacttgaaagcggagaaaaaattattggaagatgccgtaatcagtccg
ctcgactttcagtctgaagctttcattcagcgaaaatgggtaaaaaatatggttcgccac
ccctttggcgcggatttgacgctgaaggaagcttttattgaagggaaaaagtga
DBGET
integrated database retrieval system
