Salipiger abyssi: Ga0080574_TMP1219
Help
Entry
Ga0080574_TMP1219 CDS
T04681
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paby03032
]
Ga0080574_TMP1219
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP1219
Enzymes [BR:
paby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Ga0080574_TMP1219
DNA replication proteins [BR:
paby03032
]
Prokaryotic type
DNA Topoisomerases
Ga0080574_TMP1219
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ga0080574_TMP1219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
APZ51553
UniProt:
A0A1P8UQ81
LinkDB
All DBs
Position
complement(549390..552083)
Genome browser
AA seq
897 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPPKDGSVDPEHDFAMTWEIANDSRK
HVAAIAEALKSDNALILATDPDREGEAISWHLKEALTKRRSIKKDTPVSRVTFNAITKAA
VTEAMANPREIDAPLVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVE
REMEIEAFKPREYWQVKALLTTPRGQEYEARLTVLGGKKLDRFDIENATQAELAVQAITS
RALKIAGVEAKPSTRNPAAPFMTSTLQQEASRKFGMGARACMSAAQRLYEAGHITYMRTD
GIDMAPEAVSACRDAIADRFGKDYVPGSPRIYKNKAKNAQEAHECIRPTDMTKDAASLKL
REDDQRKLYDLIWKRTLACQMEAARLERTTVEIASEDGQVGLRATGQVVLFDGFLKIYEE
GRDDVADDDDKRLPQIMQGEPAAFAKASLQAQFDKAGEKADAVIDDSAPGMQSNGAAVLS
ENGAVLATQSHTQPPPRYTEATLVKKMEELGIGRPSTYASVIGTIQDREYVRKEQNRLIP
EDKGRIVTIFLLNFFRTYVGYEFTAELENELDEVSAGDLDYKQLLAKFWRDFSAAIAETS
ELRIAEVLDVLDDALAPQLYPPREDGSDPRICPKCGQGRLHLKTSRTGGFVGCGNYPECT
YTRPIAGEGADGEERLLGIDQEDEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKKGGAF
LPGWSPDDMTLEKAVTLLTLPREVGMHPDGGVIKANLGRFGPYIMHQAPDEEKPVYVNLK
EFQEVFEIGMNHAVELLAEKRANPGRGRGSAAKALKELGDHPDGGKIAVYEGRYGPYVKW
EKVNATLPKDLEPGDVSLEKALELLAEKQAKKGGKKKAPAKKPAAKKSTAKKTTKKG
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgtcgtcgtcgagtccccggctaaggccaagacaatcaacaagtatctggga
tccgactacaccgttctcgcctcctacggccatgtccgcgacctgcctccgaaggacggg
tctgtcgatcccgagcacgatttcgccatgacctgggaaatcgccaacgactcgcgcaaa
catgtcgccgccatcgccgaggcgctgaaatccgacaacgccctgatcctcgcgacggac
cccgatcgcgagggcgaggcaatttcctggcacctgaaagaggcgctgaccaagcgccgc
tcgatcaagaaggacacgccggtcagccgcgtgaccttcaacgcgatcaccaaggcggcc
gtcaccgaggccatggcaaacccgcgcgagatcgacgcgccgctggtcgaggcctatctg
gcccgccgcgcgctcgattatctggtgggctttaacctgagcccggtgctctggcgcaag
ctgccgggcgcgcgctcggcggggcgggtgcaatcggtctgcctgcggctcatcgtcgag
cgcgagatggagatcgaggcgttcaagccgcgcgaatactggcaggtgaaggcactgctc
accacgccgcgcgggcaggaatacgaagcgcggctcaccgtgctgggcggcaagaagctc
gaccgcttcgatatcgagaacgccacacaggccgagctggcggtgcaggcgatcacctcg
cgcgcgctgaagatcgccggggtcgaggccaagccctccacccgcaacccggcggcgccc
ttcatgacatcgacgctccagcaggaggcgagccgcaagttcggcatgggcgcgcgcgcc
tgcatgagcgcggcgcagcggctctatgaggccggccacatcacctatatgcggaccgac
ggcatcgacatggcgcccgaggcggtcagcgcctgccgcgacgccatcgccgaccggttc
ggcaaggattacgtgcccggcagcccgcgcatctacaagaacaaggcgaagaacgcgcag
gaagcgcacgaatgtattcgccccaccgacatgaccaaggatgcggcgagcctgaagctg
cgcgaggacgaccagcgcaagctctacgatctgatctggaagcgcacgctcgcctgccag
atggaggcggcgcggctcgagcgcaccacagtcgagatcgcttccgaggacggccaggtc
ggcctgcgcgccaccggacaggtggtgcttttcgacggcttcctgaagatctacgaggaa
ggccgcgacgacgtggccgacgatgacgacaagcgcctgccgcagatcatgcagggcgag
ccggcggcctttgccaaggcgagccttcaggcgcagttcgacaaggcgggggaaaaggcc
gacgcggtgatcgacgacagcgcccccggcatgcagagcaatggcgccgccgtgctgtcg
gagaacggcgcggtgctggccacacaaagccacacccagccgccgccgcgctacaccgag
gcgacgctggtcaagaagatggaagagctgggcatcggccgcccgtcgacctatgccagc
gtcatcggcacgatccaggatcgcgaatatgtccgcaaggaacagaaccgcctgatcccc
gaggacaagggcaggatcgtcacgatcttcctgctgaacttcttccgcacctatgtgggc
tatgagttcaccgccgagctggagaacgagctcgacgaggtttcggcgggcgatctcgat
tacaagcagctgctggccaagttctggcgcgatttctcggcggcgatcgccgagacctcc
gagctgcgcatcgccgaggtgctcgacgtgctcgacgacgcgctggcgccgcagctctac
ccgccgcgcgaagacggctccgatccgcgcatctgtccgaaatgcgggcaggggcggctg
catctcaagacttcgcgcaccggcggtttcgtcggctgcggcaactatcccgaatgcacc
tatacccgccccatcgcgggcgagggggccgacggcgaggagcgtctgcttggcatcgat
caggaggacgagatctggctcaaggcgggccgtttcggaccctatgtacagcgcggtgag
ccgacgcccgagaacaagaagccgccgcgcgcctcgctgccgaaaaagggcggggcgttc
ctgccgggctggtcgccggatgacatgactctggaaaaggcggtgacgctgctgacactt
ccgcgtgaggtgggcatgcatcccgatggcggcgtgatcaaggcgaaccttggccgcttc
ggcccctatatcatgcatcaggcccccgacgaggagaagccggtctatgtgaacctcaag
gaattccaggaggtctttgagatcggcatgaaccacgcggtcgagcttctggccgagaaa
cgcgccaatcccggacgcgggcgcggctctgccgccaaggcgctgaaggagctgggcgac
cacccggatggcggaaaaatcgctgtctacgaagggcgttacgggccgtatgtgaagtgg
gaaaaggtcaacgccaccctgcccaaggatctggagcccggcgatgtgagccttgagaag
gcgctcgagcttctggcggagaagcaggccaagaagggcggcaagaaaaaggcgccggcc
aaaaagcccgcggccaagaagagcacggccaagaaaaccaccaaaaagggctga
DBGET
integrated database retrieval system
