Salipiger abyssi: Ga0080574_TMP1232
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Entry
Ga0080574_TMP1232 CDS
T04681
Name
(GenBank) OmpA-OmpF porin, OOP family
KO
K03286
OmpA-OmpF porin, OOP family
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paby02000
]
Ga0080574_TMP1232
Transporters [BR:
paby02000
]
Other transporters
Pores ion channels [TC:
1
]
Ga0080574_TMP1232
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
DUF748
Motif
Other DBs
NCBI-ProteinID:
APZ51566
UniProt:
A0A1P8UQ91
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All DBs
Position
complement(562706..564619)
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AA seq
637 aa
AA seq
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MRLSKLAIPAATLLAAALICLLAAVFALRLVEDSSRAGVETALDLAELDWAEVDVNGLQV
FLIGEAPDEAARFQAVTVAGTVVDSARVIDQMLVADADAIRPPRFSVEILRNDEGISVIG
LIPAATDREAMIERFTDLAGDEGEVSDLLEVADFPAPEGWSEAMRFGSRVLRDLPRSKVS
VGAGAVAIKAMTDSEEARRRLLADLERQVPDGVELALDLSAPRPVITPFILRFLIDEEGA
RFDACSADTEEARSRILAAAEEAGVADGANCRLGLGVPTRRWGDAVVLAIGAVQDLGGGS
VTISNADVALLAPEGTDTGLFDRVVGELESGLPEVFALKAVLPETPDERDQGPPEFTATL
SPEGSVQLRGRVQSEISRQTADSFARALFTSESVYTAARVDDTLPSGWSARVLAGLEALG
ELSNGVVRVTPDLVAVAGNTGNADAADEIAGLLSDKLGEAAEVEIDVTYQEKLDPTLGIP
TPEECEAQIVEIIGDRKITFEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGHTDSQG
RESMNQALSQDRAQAVLDALRNRRVLTASYRVTGYGEELPIADNGTEAGREANRRIEFKL
IRPEPVPEVQTTLEELEEAGGEGDTEADGAEEEGAGE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtccaaactcgccatccccgccgcgacccttctggctgccgctcttatctgt
ctcctcgccgccgtctttgcgctgcgccttgtcgaggacagctcgcgcgccggggtcgag
accgcgctggatctggcagagctcgactgggccgaggtcgatgtgaacgggcttcaggtc
ttcctgatcggcgaggcaccggacgaggcggcacgctttcaggcggtgaccgtggccggc
acggtggtggattcggcgcgggtgatcgaccagatgctcgtcgccgatgccgacgccatc
aggccgccgcgcttttcggtcgagatcttgcgcaatgacgagggcatctcggtgatcggg
ctgatccccgccgcgacggatcgcgaggcgatgatcgagcgcttcaccgatctcgccggc
gacgagggcgaggtgtccgacctgctggaagtggcggatttcccggcgcccgagggctgg
tcggaggcgatgcgcttcggctcccgcgtgctgcgcgatctgccgcgctccaaggtgtcg
gtcggtgccggtgcggttgcgatcaaggcgatgaccgacagcgaggaggcgcgccgccgg
ctgctcgccgatctcgaacgccaggtgcccgacggggtggagctggcgctcgatctctcg
gcgccgcgcccggtgatcacccccttcatcctgcgctttctcatcgacgaggagggcgcg
cgcttcgacgcctgttccgccgataccgaagaggcccgcagccgcatccttgcggcggcg
gaagaggcgggtgtcgcggatggcgcaaactgccggctgggtctgggcgtgccgacgcgg
cgctggggcgatgccgtggtgctggccatcggcgcggtgcaggatctgggcggcggctcg
gtcacgatctccaatgccgatgtcgcgctgctggcgcccgaaggcaccgatacaggcctc
ttcgaccgcgtcgtgggcgagctggaaagcgggctgccggaggttttcgcgctgaaggcg
gtgctgcccgagacgcccgatgaaagggaccagggcccgccggaattcaccgcgacgctg
agccccgagggctcggtgcagctgcgtgggcgggtgcagtcggagatctcgcgccagacc
gccgacagtttcgcgcgcgcgctcttcacctccgagtcggtctataccgccgcgcgggtc
gacgacacgctgccctcgggctggtcggcgcgggtgctggccgggcttgaggcgctgggc
gagctgtcgaacggcgtggtgcgggtgaccccggatctggtggcggtggcgggcaatacc
ggcaatgccgacgctgccgacgagatcgcggggctgctctccgacaagctcggcgaagcg
gcggaggtcgagatcgacgtcacctatcaggagaaactcgacccgacgctgggcatcccc
acgccggaggaatgcgaggcgcagatcgtcgagatcatcggcgaccgcaagatcaccttc
gagccgggttcggccaatctcgatgcctccgccaaggatgtgatggatgacatcgccgag
ctgctgaaactctgcggcgatatcccgctggagattcagggccataccgacagccagggc
cgcgagtcgatgaaccaggcgctcagccaggatcgcgcgcaggcggtgctggatgcgctg
cgcaaccgccgggtgctgaccgcctcctatcgcgtgaccggttacggcgaggagctgccc
atcgccgacaatggcaccgaggccggacgcgaggcgaaccgccggatcgagttcaagctg
atccgccccgagccggtgccggaggtgcagaccacgctggaagagcttgaagaggccggc
ggggaaggcgatacggaggccgacggcgcggaagaagaaggggcaggggaatga
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