Salipiger abyssi: Ga0080574_TMP1590
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Entry
Ga0080574_TMP1590 CDS
T04681
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
paby
Salipiger abyssi
Pathway
paby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ga0080574_TMP1590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paby03019
]
Ga0080574_TMP1590
03110 Chaperones and folding catalysts [BR:
paby03110
]
Ga0080574_TMP1590
03029 Mitochondrial biogenesis [BR:
paby03029
]
Ga0080574_TMP1590
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paby04147
]
Ga0080574_TMP1590
Enzymes [BR:
paby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Ga0080574_TMP1590
Messenger RNA biogenesis [BR:
paby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ga0080574_TMP1590
Chaperones and folding catalysts [BR:
paby03110
]
Heat shock proteins
HSP60 / Chaperonin
Ga0080574_TMP1590
Mitochondrial biogenesis [BR:
paby03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Ga0080574_TMP1590
Exosome [BR:
paby04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ga0080574_TMP1590
Exosomal proteins of other body fluids (saliva and urine)
Ga0080574_TMP1590
Exosomal proteins of breast cancer cells
Ga0080574_TMP1590
Exosomal proteins of colorectal cancer cells
Ga0080574_TMP1590
Exosomal proteins of bladder cancer cells
Ga0080574_TMP1590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8753
Motif
Other DBs
NCBI-ProteinID:
APZ51924
UniProt:
A0A1P8UR74
LinkDB
All DBs
Position
complement(914988..916631)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFDTDARSRMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGI
DLATAKVVEAIKAAARPVNDSNEVAQVGTISANGEAEIGKQIADAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNADKMIAELDDCMILLHEKKLSSLQPLVPLLEQV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLENVTMDMLGTAKTVTLTKDETTIVDGHGEKAEIEARVSQIRTQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QGAKALEGLTGVNSDQNAGITIVRKALESPLRQIAENAGVDGSVVAGKIRESDDLKFGYN
AQTDEYGDMFKFGVIDPAKVVRTALEDAASIAGLLITTEAMVADKPQKEGAAPAGGMPDM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagatgtgaagttcgataccgacgcccgctcgcgcatgctcaagggcgtg
aacatcctcgccgacgcggtgaaggtgaccctcggcccgaaaggccgcaacgtggtgctc
gacaaatccttcggcgccccccgcatcaccaaggacggtgtgtcggtggccaaggagatc
gaactggaagacaagttcgagaacatgggcgcgcagatggtgaaggaagtcgcttcccgc
accaatgacgaggccggcgacggcaccaccaccgcgacggttctggcccaggccatcgtc
aaggaaggcatgaagtcggtcgcagcgggcatgaacccgatggacctcaagcgcggcatc
gacctggccaccgccaaggtcgtcgaagccatcaaggccgctgcccgcccggtgaacgac
tccaacgaagtcgctcaggtcggcaccatctccgccaacggcgaagccgagatcggcaag
cagatcgccgacgcgatgcagaaggtcggcaacgagggtgtgatcaccgtcgaagagaac
aagggcctcgaaaccgagaccgacgttgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaacgccgacaagatgattgcagagctcgacgactgcatgatc
ctgctgcacgagaagaaactctcctcgctgcaaccgctggtgccgctgctcgagcaggtg
atccagtcgcagaaaccgctgctgatcatcgcggaagacgtcgaaggcgaagcgctggcg
accctcgtggtcaacaagctgcgcggcggcctgaagatcgcagccgtgaaagcaccgggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggtg
atctcggaagatctgggcatgaagctcgagaatgtcaccatggacatgctgggcaccgcc
aagaccgtcaccctgaccaaggacgagaccaccatcgtcgacggccatggcgagaaagcc
gagatcgaagcgcgcgtttcgcagatccgcacgcagatcgaggaaaccacctccgattac
gaccgtgagaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatccgc
gtcggcggcatgaccgaagtggaagtgaaagagcgcaaggaccgtgtcgatgacgcgctg
aacgcgacccgcgcggccgttcaggaaggcatcgtggtcggcggcggcgtcgcgctggtg
cagggcgccaaggcgctcgagggcctgacgggtgtcaacagcgaccagaacgccgggatc
accatcgtgcgcaaggcactggaatccccgctgcgtcagatcgccgagaacgccggtgtc
gacggctccgtcgtcgcaggcaagatccgcgaatccgacgatctgaagttcggctacaac
gctcagaccgacgaatatggcgacatgttcaagttcggcgtgatcgacccggcgaaagtc
gtgcggaccgcactggaagacgccgcttcgatcgcgggcctgctgatcaccaccgaagcg
atggtggccgacaagccgcagaaagaaggcgcagcgccggccggcggcatgcccgacatg
ggcggcatgggcggcatgatgtaa
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