Salipiger abyssi: Ga0080574_TMP1600
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Entry
Ga0080574_TMP1600 CDS
T04681
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paby03021
]
Ga0080574_TMP1600
Transcription machinery [BR:
paby03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ga0080574_TMP1600
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
APZ51934
UniProt:
A0A1P8UR84
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All DBs
Position
complement(925739..926617)
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AA seq
292 aa
AA seq
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MTPESFNDQTISRQAMKAELLDAETELQLAYAWRDRRDEAALHRLITAYMRLAISMAAKF
KRYGAPMGDLIQEAGLGLMKAADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGS
TSSQKSLFFNMRRVQARLEREASAEGRQWERHKLHAAIAEEIGVPLHDVQMMEGRLSGSD
FSLNATQSTDEDGREWIDTLEDEGEQSSSLVEGRLDNAQLREWLLTALTGLNDREQFIVR
ERKLRDETRTLESLGQELGLSKERVRQLEAAAFAKMRKSLEAQSGEVQQFLA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgagtccttcaacgaccagacgatctcccgccaggccatgaaggccgagctt
ctggatgcggaaaccgagttgcagcttgcctatgcctggcgcgaccgccgcgacgaggcg
gcgctgcaccggctgatcactgcctatatgcggctggccatctcgatggcggcgaaattc
aagcgctacggagcgccgatgggcgatctcattcaggaggccggcctcggcctgatgaag
gccgccgacaagttcgacccggaccggggcgtgcggttttccacctatgcggtctggtgg
atcaaggcgagcattcaggattacgtgatgcgcaactggtcgatggtgcgcaccggctcg
acctcttcgcagaaatcgctgttcttcaatatgcgccgggtgcaggcgcggctggagcgc
gaggcctccgccgagggccggcaatgggagcgtcacaagctgcacgccgccatcgccgag
gagatcggcgtgccgctgcatgatgtgcagatgatggagggccggctttcgggctcggat
ttctcgctgaatgcgacgcaatccaccgatgaagatggccgcgaatggatcgacacgctg
gaggacgagggcgagcagagctcgtcgctggtcgagggccgtctcgacaatgcccagctg
cgcgaatggctgttgaccgcgctgaccgggctcaacgaccgcgagcagttcatcgtgcgc
gagcgcaagctgcgcgacgagacccgcacgctggaaagtctcggccaggagctggggctc
tcgaaggagcgcgtgcggcaattggaagccgccgccttcgccaagatgcggaagtcgctt
gaagcccagtcgggagaggtgcaacagttcctcgcatga
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