Salipiger abyssi: Ga0080574_TMP1770
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Entry
Ga0080574_TMP1770 CDS
T04681
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
paby
Salipiger abyssi
Pathway
paby00061
Fatty acid biosynthesis
paby00071
Fatty acid degradation
paby01100
Metabolic pathways
paby01212
Fatty acid metabolism
paby02024
Quorum sensing
paby04146
Peroxisome
Module
paby_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Ga0080574_TMP1770
00071 Fatty acid degradation
Ga0080574_TMP1770
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Ga0080574_TMP1770
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ga0080574_TMP1770
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
paby01004
]
Ga0080574_TMP1770
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paby04147
]
Ga0080574_TMP1770
Enzymes [BR:
paby01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Ga0080574_TMP1770
Lipid biosynthesis proteins [BR:
paby01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Ga0080574_TMP1770
Exosome [BR:
paby04147
]
Exosomal proteins
Exosomal proteins of breast milk
Ga0080574_TMP1770
Exosomal proteins of breast cancer cells
Ga0080574_TMP1770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
APZ52104
UniProt:
A0A1P8URQ1
LinkDB
All DBs
Position
complement(1086730..1088703)
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AA seq
657 aa
AA seq
DB search
MADTSEGAASPRSIPGLLQRNASRFAARPAYREKEYGIWQSWSWSETEKEIEAFALGLLN
LGVAPGDHVAVIGRNRPTLYWAMVAAQMCGAVPVPLYQDAVAEEMEYVLQHCGARFVIAA
DQEQVDKVIEIQDDLHQFEHMIYVDPRGMRKYDHRQLHDYAHVQDQGRAAHDELIGELTA
RREALDYDDTCVMLYTSGTTGKPKGVVLSNRNIIETAKNSSEFDKLGPGEEVLAWLPMAW
VGDFIFSIGQAYWTGFCVNCPESPETMLTDLREIAPSYYFAPPRVFETQLTQIMIRMEDA
GALKRRMFHYFMDHARRVGPKILDGKPVGAFDRLKYALGSVFVYGPLKNALGFSRVRVGY
TAGEAIGPEIFDFYRALGINLKQLYGQTEASVFITQQPDHEVRPDTVGVPSPGVEIRITE
SGEVFYRSPGVFVEYYQNPESTADTKDPEGWVATGDAGFFEEGTGHLRIIDRAKDVGKMA
DGALFAPKYVENKLKFYPNILEAVVFGAGRDRCTAFINIDLTAVGNWAERNNIAYASYQE
LAGHPQVLETIREHVEEVNASVAEDEMLSGCQIHRFLVLHKELDADDGELTRTRKVRRKI
IAEKFHDLVTALYDGSESIYTETEVTYEDGRKGRIKATLTIMDAQVVPVAPPAMAAE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacacgtccgagggcgcggcttcgccgcggtcgattccggggctgttgcagcgg
aacgcgagccgtttcgccgcccgtccggcctatcgcgagaaagaatacggcatctggcag
agctggagctggtcggaaaccgagaaggagatcgaagccttcgcgctgggcctgctcaat
ctcggcgtggcgcccggcgatcatgtggcggtgatcgggcgcaaccgtccgacgctctac
tgggcgatggtggcggcgcagatgtgcggcgcggtgccggtgccgctctatcaggacgcg
gtcgccgaagagatggaatatgtgctccagcattgcggcgcgcgtttcgtcattgccgcc
gatcaggagcaggtcgacaaggtcatcgagatccaggacgatctgcaccagttcgagcac
atgatctatgtcgatccgcgcggcatgcggaaatacgaccatcgccagttgcacgattac
gcccatgtgcaggaccagggccgcgctgcccatgacgagctgatcggcgagctgaccgcg
cggcgcgaggcgctggattacgacgacacctgcgtgatgctctacacctcgggcaccacc
ggcaagcccaagggcgtggtgctgtcgaaccgcaatatcatcgagaccgccaagaactcg
tcggagttcgacaagcttggcccgggcgaggaggttctggcctggctgcccatggcctgg
gtcggcgatttcatcttttccatcggtcaggcctattggaccgggttctgcgtgaactgc
ccggaaagccccgagaccatgctgaccgatctgcgcgagatcgcgcccagctattatttc
gcgccgccgcgtgtgttcgagacgcagctcacccagatcatgatccggatggaggatgcc
ggcgcgctgaagcggcggatgtttcactatttcatggatcatgcgcgccgtgtcgggccg
aagatcctcgacggcaagccggtgggcgcgttcgaccggctgaaatacgcgcttgggtcg
gttttcgtctacggtccgctgaagaacgcgctgggcttttcccgggtgcgggtgggctat
accgcgggcgaggcgatcgggccggagatcttcgatttctaccgcgcgctgggcatcaac
ctgaagcagctctacggccagaccgaggccagcgtcttcatcacccagcagcccgatcac
gaggtgcgacccgacacggtgggggtgccgagccccggggtggagatcaggatcaccgag
agcggcgaggtgttctaccgctcgcccggggtcttcgtggaatattaccagaaccccgag
agcacggcggataccaaggatccggagggctgggtggccaccggcgatgccggtttcttc
gaggagggcaccggacatctgcggatcatcgaccgtgccaaggatgtgggcaagatggcc
gacggcgcgctgtttgcgccgaaatatgtggagaacaagctcaagttctatccgaatatt
ctcgaggcggtggtgttcggcgccggtcgcgaccgctgcaccgccttcatcaatatcgac
ctgacggcggtgggcaactgggccgagcgcaacaatatcgcctatgcctcctatcaggag
ctggccgggcatccgcaggtgctggagacgatccgcgagcacgtggaggaggtgaatgcc
agcgtggcggaggacgagatgctgtcgggctgccagatccaccgcttcctggtgctgcac
aaggagctcgacgccgacgatggcgagctgacgcggacccgcaaggtgcggcgcaagatc
atcgccgagaagttccacgatctggtgaccgcgctctatgacggctccgagagcatctat
accgagaccgaggtcacctatgaggacggtcgcaagggcaggatcaaggcgacgctgacg
atcatggacgcgcaggtggtgccggtggcgccgcccgcgatggcggcggaatga
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