Salipiger abyssi: Ga0080574_TMP1797
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Entry
Ga0080574_TMP1797 CDS
T04681
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Ga0080574_TMP1797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paby03019
]
Ga0080574_TMP1797
03009 Ribosome biogenesis [BR:
paby03009
]
Ga0080574_TMP1797
03036 Chromosome and associated proteins [BR:
paby03036
]
Ga0080574_TMP1797
Enzymes [BR:
paby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Ga0080574_TMP1797
Messenger RNA biogenesis [BR:
paby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ga0080574_TMP1797
Ribosome biogenesis [BR:
paby03009
]
Eukaryotic type
90S particles
RNase
Ga0080574_TMP1797
Prokaryotic type
rRNA processing factors
Ga0080574_TMP1797
Chromosome and associated proteins [BR:
paby03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Ga0080574_TMP1797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
APZ52131
UniProt:
A0A1P8URV2
LinkDB
All DBs
Position
1117351..1118037
Genome browser
AA seq
228 aa
AA seq
DB search
MKRSAEIEALEARLGLRFERPDLLRRALTHSSMSGPGREDNQRLEFLGDRVLGLVMAEAL
LAGDRKASEGQLAPRYNALVRKEACAEVAREVDLGAALKLGRSEMMSGGRRKMALLGDAM
EAVIAAVYLDAGFDAAKEMILRLWGDRVAQVEADARDAKTSLQEWAQARGMAPPAYVETG
RSGPDHAPVFTIEARLDNGATAQATAGSKRKAEQQAAAALLDKVGKGD
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctgccgagatagaagcgctcgaggcgcgtctcggcctgcgtttcgagcgg
ccagacctgctgcgccgggcgctgacgcattcctcgatgtccgggcccgggcgcgaggac
aaccagcggctggaattcctcggcgaccgggtgctcgggctggtgatggccgaggcgctg
ctggccggtgaccgcaaggcctccgaaggccagctcgcgccgcgctacaacgcgctggtg
cgcaaggaggcctgcgccgaagtggcgcgcgaggtcgatctgggcgcggcgctgaaactc
gggcggtccgagatgatgtcgggcgggcggcgcaagatggcgctgctcggcgacgcgatg
gaggcggtgatcgccgcagtctatctcgatgccgggttcgacgcggccaaggagatgatc
ctgcggctctggggcgatcgggttgcgcaggtcgaggccgatgcgcgcgacgccaagacc
tcgcttcaggaatgggcgcaggcgcgcggcatggcgccgcccgcctatgtcgaaaccggg
cgctccggcccggatcacgccccggtcttcaccatcgaagcgcggctggacaacggcgca
acggcacaggccaccgccggctccaagcgcaaggccgagcagcaggccgcggcggcactg
ctcgacaaggtgggcaagggtgactga
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integrated database retrieval system
