Salipiger abyssi: Ga0080574_TMP1815
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Entry
Ga0080574_TMP1815 CDS
T04681
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
paby
Salipiger abyssi
Pathway
paby03030
DNA replication
paby03430
Mismatch repair
paby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ga0080574_TMP1815
03430 Mismatch repair
Ga0080574_TMP1815
03440 Homologous recombination
Ga0080574_TMP1815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paby03032
]
Ga0080574_TMP1815
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP1815
Enzymes [BR:
paby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ga0080574_TMP1815
DNA replication proteins [BR:
paby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ga0080574_TMP1815
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ga0080574_TMP1815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
APZ52149
UniProt:
A0A1P8URX1
LinkDB
All DBs
Position
1135478..1136506
Genome browser
AA seq
342 aa
AA seq
DB search
MKLTGRDAQAFFRKPDPTRAGVLLYGEDAMRVAHRRQEVIAALVGPEGEAEMRLTRISGA
ELRRDPAMLLDAIKAQGFFPGPRVAFVEEAGDGLADIVSRALEDWREGDAQVIVTAGQLA
ARSKLRKLFEGHRNALAIGIYSDPPGREEIEAALSKAGLEQVDRAAFDALEALGRALEPG
DFRQVLEKLALYKLDDPAPLTPEEVAACAPASIEAELDDVLNVVAEGRSAEIGPLVQRLE
GQGVTPVTLLIMAMRHFRVLYALASSPGGPQAGLQKLRPPLFGPRRDRMLRQAQGWSADR
LEAALGMLMDTDLSIRSAGQRAPAMALVERGFVRLAWLRNRR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacgggccgcgacgcacaggcctttttccgcaagccggatccgacgcgcgcc
ggcgtgctgctctatggcgaggacgcgatgcgcgtggcgcatcgccggcaggaggtcatc
gccgcgctggtcggccccgagggcgaggccgagatgcggctcacccggatttccggcgcc
gagctgcgccgcgatccggccatgctgctcgacgcgatcaaggcgcaggggtttttcccc
ggcccgcgcgtggcctttgtcgaggaggcgggcgacgggctcgccgatatcgtctcgcgc
gcgctggaggactggcgcgagggcgatgcgcaggtgatcgtgaccgccgggcagcttgcg
gcgagatcgaagctgcgcaagctcttcgaggggcatcgcaacgcgctcgccatcggcatc
tattccgacccgccgggccgcgaggagatcgaggcggcgctgagcaaggccgggctggaa
caggtcgaccgcgccgccttcgacgcgctggaggcgctgggaagggcgctggagccgggc
gatttccggcaggttctggaaaagctggcgctctacaagctcgacgacccggcgccgctg
acgcccgaagaggtcgccgcctgcgccccagcctccatcgaggccgagctcgacgacgtt
ctgaacgtggtggccgagggccgcagcgccgagatcggtccgctggtgcagcgcctcgaa
ggtcagggcgtcacgccagtcacgctgctgatcatggcgatgcggcacttccgggtgctt
tacgcgttggcctcgtctccgggcgggccgcaggcggggctgcaaaagctgcgtccgccg
cttttcggtccgcgccgcgaccgcatgctgcgacaggcgcaaggctggtccgccgaccgg
ttggaggcggcgctgggaatgctcatggacaccgacctgtcgatccgctcggcggggcag
cgggcgccggccatggcgctggtcgagcgcggtttcgtccggctggcctggctgcgcaac
cggcgatag
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