Salipiger abyssi: Ga0080574_TMP1890
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Entry
Ga0080574_TMP1890 CDS
T04681
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
paby
Salipiger abyssi
Pathway
paby00300
Lysine biosynthesis
paby01100
Metabolic pathways
paby01120
Microbial metabolism in diverse environments
paby01230
Biosynthesis of amino acids
Module
paby_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ga0080574_TMP1890
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paby01002
]
Ga0080574_TMP1890
Enzymes [BR:
paby01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Ga0080574_TMP1890
Peptidases and inhibitors [BR:
paby01002
]
Metallo peptidases
Family M20
Ga0080574_TMP1890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
APZ52224
UniProt:
A0A1P8US39
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All DBs
Position
1214660..1215934
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AA seq
424 aa
AA seq
DB search
MSDTLSQRIEARRDELIALTQDLIRIPTLNPPGENYRAVCDYLRQRLEARGFACQMIRAE
GAPGDSDRYPRWNLVARHEGAQSGDCVHFNSHHDVVEVGHGWTRDPFGGELDGDRIYGRG
ACDMKGGLAASIIAAEAFIDAHPGYAGAIEISATADEESGGYGGVAYLAEQGLFAPERVQ
HVIIPEPLNKDRICLGHRGGWWAEIETKGEIAHGSMPFLGDCAVRHMGAVLAAFEERLFP
AMAARHTDMPVVPEGARQSTMNINSIHGGQPENPPDFNGLPAHCVPDSCRIVIDRRFLIE
ETVEGVRDEVIGLLDDLKARRANFDYEIRELNRVIPSMTDREAPVVRTVTEAIREELGAE
ATYVASPGSYDQKHIDRIGKLKNCIAYGPGVLELAHKPDEWVGVTDMLGSARVMGRSLEH
LLVG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccctctcccaaaggatcgaggcgcggcgcgacgagctgatcgcgctgacc
caggatctgatccgcatcccaacgctgaacccgcccggcgagaattaccgcgcggtctgc
gactatctccggcagcggctggaggcgcgcggctttgcctgtcagatgatccgcgccgag
ggcgcccccggcgacagcgatcgctatccgcgatggaacctcgttgcccggcatgaaggg
gcgcagagcggcgactgcgtgcatttcaactcgcatcacgacgtggtcgaggtcggccat
ggctggacccgcgatccctttggcggcgagctcgacggcgaccggatctatgggcgcggc
gcctgcgacatgaagggcggtctcgccgcctccatcatcgccgccgaggcctttatcgac
gcgcatcccggctacgccggcgccatcgagatcagcgccacggccgacgaggaatccggc
ggctatggcggtgtcgcctatctggcggagcaggggttattcgcgcccgagcgggtgcag
catgtgatcatccccgaaccgctcaacaaggatcgcatctgcctcggccatcgcggcggc
tggtgggcggagatcgagaccaagggcgagatcgcccatggctccatgcccttcctcggc
gattgcgcggtgcgccacatgggcgcggtgctggcggccttcgaagaacggctgttcccc
gccatggcggcgcggcacaccgatatgccggtggtgcccgaaggcgcgcgccaatcgacc
atgaacatcaactcgatccatggcggccagcccgagaacccgccggatttcaacggcctg
cccgcccattgcgtccccgacagctgccgtatcgtgatcgaccggcgttttctgatcgaa
gagaccgtcgagggcgtgcgcgacgaggtgatcgggctgctcgacgatctcaaggcccgg
cgcgccaatttcgactacgagatccgcgagctgaaccgggtgatcccgtcgatgaccgac
cgcgaggccccggtggtgcgcacggtgaccgaggcgatccgcgaggagctgggggcggag
gcgacctatgtcgcctcgccgggcagctacgaccagaaacatatcgaccgcatcggcaag
ctgaagaactgcatcgcctacgggccgggcgtgctggagctggcgcacaagcccgacgaa
tgggtcggcgtgaccgatatgctcggcagcgcgcgggtgatgggccgcagtctggaacat
ctgctggtcggctga
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