Salipiger abyssi: Ga0080574_TMP1987
Help
Entry
Ga0080574_TMP1987 CDS
T04681
Name
(GenBank) DEAD/DEAH box helicase
Organism
paby
Salipiger abyssi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
APZ52321
UniProt:
A0A1P8USE4
LinkDB
All DBs
Position
1333913..1337413
Genome browser
AA seq
1166 aa
AA seq
DB search
METIDELTTFLTDATVDGILGRLLYRGAAWSLMRENGVLPPNAPPLGATIETDLAEHGFA
LLRGAMALRAQAGTSDLTSKAFERSANAFEALVRNGDPESHDRGFRRTIATAAYHLAGFS
AVAYSLFNETAGDLNTSPGETAIQHLILRDLGQLRGFVRDWLDNDDHNDEQIAEVLRGEE
PDVDEALSTILNTTICRALAYFDFALETGETEPIETARALLDVAVSLADNAENVPLWWIS
NLCRHLIDDLWQHSLHENLPTEPPEGTEEKYPDLRRLFISSLYARKTSEVELWPSQREAA
RRSTDVTDDLVVALPTSAGKTRVAEIAALMTLSSARRVLIVTPLRALSAQTERSFRKTFA
PLGFSVSSLYGASGLSAGDEDALRTREIIIATPEKLDFALRSDPSLIDDVGLIVLDEGHM
IGPSEREIRYETLVQRLLRRTDAESRRIVCLSAILPSGEELDDLTAWIRSDEPGAPVLSD
WRPTRQRFGTLTWRGQDALLRLDLNRNGPFIDKFVVQKPARGKEKLPYPRKTSHLTLFAA
WEFAGQGKRTLIFSTQANWVEGFGKQVVDLCKRGYLGSLLEDEAPIARALEVGKEWLGED
HPAVASLKVGVAIHHGRLPSPFLRELETLLSEGVLKVIVASPTLSQGLNLNAAVMLVPYL
VRRGEKIKGEEFANVAGRAGRAFVDVEGLIVHVMFDKIRWREREWRELVASAKARTLKSG
LIQIVAEILERLAREGVLERDDAWEYLANAREAWRSPAEEAAVAERLAAGAEYDADGGED
EGGDDEGETIDEEPLSQIVERLDATVFGLIEALDADRADLPTLLDEALKGSLWARQIARE
DEDIAPLHKKVFEARAELIWKSTTTDARRGHFAMGVGLEAGLAIDAMADELADLLDQADA
AALSGDVDELVDALCGLGERLLFMRPFIPDKTNALPGNWKDILRRWVSGDDVANIGPQNM
RAVEEAFTYRLVWALEAVRTRRMSLGWSPETVVGGAAAAVETGVPQFMMSMLIRAGLPSR
RAAMAAIEDAEPAFVTPAEMRAWLESDEITAYTDAGDWPTPDTAALWARFRTEALSGGIQ
KWSVEHYKRLLDTATAPPAGLYRIVTDDGDGRTWMATPDYQRVAAFKKSALDPKPSLFSG
RLPGNTRLVEALRVGRGKLRWPRANT
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttggagacgattgacgagctgacaactttcctgacggatgcgaccgtcgatggcatcctc
ggacgcctgctatatcgcggcgcggcatggtcgctgatgcgcgaaaacggtgtactgccg
ccgaatgcgccgccgctcggcgcgacgatcgaaacggatcttgcggaacacggctttgct
ttgcttcggggcgcaatggcgcttcgtgctcaggccggcacctcggacctgaccagcaag
gcgttcgagcgctccgccaatgccttcgaagctcttgttcgcaatggtgatccggaatcg
catgatcgaggcttccgccgcaccatcgctaccgcagcctatcatctcgccggattttca
gccgttgcctattcgctcttcaacgagaccgcgggcgacctcaacacctcacccggcgaa
acagcgatccaacatctgatcctgcgcgatctcggccaattgcgcggcttcgttcgcgat
tggctggacaacgacgatcacaacgatgagcagatcgcggaggttctgcggggtgaagag
cccgatgtcgatgaagctctgtcgaccatcctcaacacgacgatctgccgggcgctggcg
tattttgatttcgcgcttgagacgggcgaaaccgagccgatcgagacagcaagggcattg
ctcgacgtcgcggtcagtcttgcagacaatgcggagaatgtccccctgtggtggatctcg
aacctatgtcgtcaccttatcgatgacctgtggcagcattccctgcacgaaaatctgccg
accgagccaccggaaggaacggaggaaaaatacccggacctgcgcaggctattcatctca
tcgctctatgctcgcaaaacttccgaggtggagttgtggccatcgcagcgcgaagcagcc
cggcgctccaccgacgtcacggacgatctggttgtcgccttaccaaccagcgcaggtaaa
acgcgagtggccgagattgcagcgttgatgaccctttcgtcggcgcgccgggtactgatt
gtcacgccgctgcgcgcgctgtccgcacaaaccgagcgatccttcagaaaaaccttcgcg
cctctcggcttcagcgtctcctcactttacggtgccagcggcctttcggcaggcgatgaa
gacgcattgcgcactcgcgaaatcatcatcgcgacacctgagaagctcgacttcgcactg
cgaagcgacccatctctgatagacgatgtcggtctcatcgtcctcgacgaaggccacatg
attggtccgagcgagcgtgaaatccgttatgagacgctggtccaacgcctgcttcggcgc
acggacgcggagagccgtaggattgtctgtctgtccgccatcctgcccagcggcgaagag
ctagacgatcttacggcatggatacgctccgacgaacccggcgcgccggtgctctcagac
tggcgtccgacccgacaacgatttggcacgctcacttggcggggccaagacgcattgctt
cgcctcgatctgaatcgcaatggtccgttcatcgataaatttgtcgtgcagaaaccggct
agaggcaaagaaaaattaccctacccacgcaagacgtcgcatctcaccttgttcgctgca
tgggagttcgccggccaaggaaagaggacgctgatcttttcaacccaagccaattgggtc
gaaggcttcggcaaacaagtcgtggacctctgcaagcgtggatatttgggctcactgctg
gaggatgaggcaccgattgcccgcgctcttgaggtcggcaaggagtggttgggagaagac
caccccgccgttgccagtctgaaggtaggcgtcgcgatccatcacggtcggcttccgagc
ccattcctgcgcgaattggaaacgctgctgtccgagggcgtcttgaaggtcatcgttgca
tcgccgacgctctcccaaggcctcaatctcaacgctgcagttatgctggtgccgtatctg
gtccgcagaggcgagaagatcaaaggcgaggagttcgcaaatgtcgccgggcgagccggc
cgcgctttcgtggacgtcgaaggcctcatcgttcacgtgatgttcgacaagatcagatgg
cgagaaagagagtggcgtgagttggttgcctccgccaaggcccgcacactgaagagcggc
ctcatccaaatcgtcgcagagatccttgagcgcctggctcgtgaaggcgttctggagcgc
gatgacgcatgggaatatctcgccaacgcccgcgaagcctggagatcgccagcggaggaa
gccgcagtcgccgagcgcttggcagccggcgcggaatatgacgcagatggcggtgaagat
gaaggcggtgatgacgagggggagaccatcgacgaggaaccgctttcgcaaatcgttgaa
cgcctcgatgcgactgttttcggattgatcgaagcgctggacgccgaccgggcggatctg
ccaacgctcttggacgaggcgctcaaagggtcgctctgggcccgccagatagcccgagag
gacgaggacatcgcgccattgcacaagaaggtgttcgaggcgcgcgctgaactcatatgg
aagtccactacaacggatgcgcggcgtggacatttcgcgatgggtgtcgggctcgaggct
gggctcgccattgatgccatggcagacgaattggccgatctcctcgatcaagccgacgct
gctgcgctgagtggcgatgtcgacgaacttgtcgacgccctctgtggtctcggggaacgc
ttgttgttcatgcggcctttcattcccgacaagacgaacgcgctaccgggcaattggaag
gacatcctgcgccgttgggtgtctggcgacgatgtcgccaatattgggcctcagaatatg
cgggctgtcgaagaggccttcacctatcgtttggtctgggccttggaagctgttcgtacc
cgccgcatgtccctcggctggtctccagaaacagtggtggggggcgccgcagcagcggtc
gaaaccggcgttccacaattcatgatgtcgatgctgatccgcgcgggccttccatcacgg
cgcgcagccatggcggcaatcgaggatgccgagccagccttcgtcacgcccgcggagatg
agggcctggctcgaatccgacgagatcacagcttacaccgatgctggtgattggccgacc
cccgacacggcagcgctatgggcgcggttccgaacggaggccctgagtggcggcattcag
aaatggtcggtcgaacactacaagcgcctgctcgacaccgcgaccgccccacctgccggc
ctctatcggattgtcacagacgatggagatgggcggacctggatggcgacgcctgactat
cagcgggtggcggcattcaagaaatcggcacttgatccgaagcccagcctgttctcgggg
cggctgccgggcaatactaggttggtggaagcgttgcgcgtcggccgtgggaaactgcgc
tggccacgggccaacacgtag
DBGET
integrated database retrieval system
