Salipiger abyssi: Ga0080574_TMP2221
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Entry
Ga0080574_TMP2221 CDS
T04681
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP2221
Enzymes [BR:
paby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ga0080574_TMP2221
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Ga0080574_TMP2221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
APZ52555
UniProt:
A0A1P8UT17
LinkDB
All DBs
Position
1594314..1597244
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AA seq
976 aa
AA seq
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MFERSATPRVFALAPGVDFPAALVAGLRARMEGQPPEAMARAELIVNTTRMARRIRQIFD
QGPATLLPRIRLLGNVADPIALAHLPAPVSPLRRRLELTGLVSKLLDAQPDLAPRSTLFD
LADSLATLMDEMQDEGVSPDDIAALDVSDESGHWQRALSFFNIVQRYFEDGDEAPDTVAF
RRFALEQRLKDWETQPPQHPVILAGSTGSRGMTNRLMQAVARLPQGALVLPGFDFDTPEA
VWDGLTDALSGEDHPQFRFARLMRELDLRPGDIAHWTEQAAPSPGRNRLISLALRPAPVT
DQWRDEGPGLPDLTEATTELTLVEAPTQRDEATAIALRLRQAAEDGVTAALITPDRMLTR
QVTAALDRWGILPDDSAGTPLQLTPPGRFLRHVSTLFQQDLTAETLLTLLKHPLTHSGHA
RGEHLRATRELELHIRRKSWPYPQPEQLRAWGVAAKQEAWAEWVAACFCHPPQHGTRPLA
DWIEDHLSRAESIAAGPQGTDSELWKEAAGRKTRAVIEDLRDEAGYGTDLDARDYADLFG
AVLSGHELRDRDAPHPRILIWGTLEARVMGADLLILGGLNEGSWPELPGADPWLNRRMRH
RAGLLVPERRIGLAAHDFQQAVAAPQVWLTRALKSDDAETVPSRWLNRLMNLMNGLPDRD
GPQALKDMRARGGHWLALARALEKPVPCAPAPRPSPAPPLAARPRTLSVTEIKHLIRDPF
HIYAKRVLRLTPLNPLQRAPDALLRGTLIHRVLEEFVKESVSDPVQLSVEALLRKTDAII
CDPQIVPYPTTRHLWRARLAKIALWFTETERARQAVATPAHYEIMGHGEIPQLGFTLRGK
ADRIDIDARGGAHLYDYKTGAAPSPKEQRYFDKQLLLEAAMVERGAFRELQPRHTERAVF
VSVAASPKEVPAPLDEMPAAQVWAEFETLMTRWAEPERGYTARAALLKEKDVSEYDHLAR
FGEWDVIDEAQREVLE
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcgctctgccaccccgcgcgtcttcgcgctcgcccccggtgtcgatttcccg
gcggcgctggtcgccggcctgcgcgcccgcatggaagggcagccgcccgaggccatggcg
cgggccgagctgatcgtgaacaccacccgcatggcgcggcgcatccggcagatctttgac
caggggccggccacgctgctgccgcgcatccggctcttgggcaatgtcgccgacccgatc
gcgctggcgcatctgccggcgccggtctcgccgctgcggcggcggctggagctgaccggg
ctggtgtcgaaactgctcgacgcgcagcccgatctcgcgccgcgcagcacgctgttcgac
ctcgccgacagcctcgccacgctgatggacgagatgcaggacgagggcgtctcgcccgac
gatatcgcggcgctggatgtgagcgatgaatccggccactggcagcgggcgctcagcttt
ttcaacatcgtgcagcgttatttcgaggacggggacgaggcgccggacaccgtcgccttt
cgccgttttgcgctggaacagagactgaaagactgggaaacgcagccgccgcagcacccg
gtgatcctggccggctccaccggctcgcgcgggatgaccaaccggctgatgcaggcggtg
gcacggctgccgcagggcgcactggtgctgcccggcttcgatttcgacacgcccgaggcg
gtctgggacgggctcaccgatgcgctctcgggcgaggatcacccgcagttccgttttgcc
cggctgatgcgcgagctggatctgcgcccgggcgacattgcccactggaccgaacaggca
gcgcccagccccgggcgcaaccggctgatctcgctggcgctgcggcccgcgccggtcacc
gatcaatggcgggacgaggggccgggcctgcccgatctgaccgaggccaccaccgagctg
acgctggtcgaggcacccacccagcgcgacgaggccaccgccatcgcgctgcgcctgcgt
caggctgccgaggacggcgtgaccgccgcgctgatcacccccgaccggatgctgacccgg
caggtgacggcggcgctcgaccgctggggcatcctgcccgacgacagcgccggcacgccg
ctacaactgaccccgccgggccggttcctgcgccatgtttcgaccctgttccagcaggat
ctgaccgccgagacgctgctcaccctgctcaagcatccgctcacccatagcggccacgcg
cgcggcgagcacctccgcgccacccgcgagctggagctgcatatccgccgcaaatcctgg
ccctatccgcagcccgagcagctgcgcgcctggggcgtggcggcgaaacaggaggcctgg
gcggaatgggttgccgcctgtttctgccatccaccgcaacacggcacccgcccacttgcc
gactggatcgaagaccatctgtcccgcgccgagagcatcgccgccgggccgcagggtacg
gattccgagctctggaaagaggccgccgggcgcaagacccgcgcggtgatcgaagatctg
cgcgacgaggccgggtacggcaccgatctggacgcgcgcgactatgccgacctctttggc
gcggtgctttcgggacacgagctgcgcgaccgtgatgcgccgcatccgcgcatcctgatc
tggggcacgctggaggcgcgggtgatgggcgccgatctgctgatcctcggcgggctgaac
gaaggcagctggcccgagctgcccggcgccgacccctggctgaaccggcggatgcggcac
cgcgcgggccttttggtgccggaacggcgcatcgggctggccgcgcatgactttcagcag
gcggtggccgcgccgcaggtctggctgacccgcgcgctgaaatccgacgatgcggaaacc
gtgccctcgcgctggctgaaccggctgatgaacctgatgaacgggctgcccgaccgggac
gggccgcaggcgctgaaggacatgcgcgcgcgcggcggccattggctggcgctggcccgc
gcgctggaaaagcccgtgccctgtgccccggcgccgcgcccttcgccggccccaccgctg
gcggcgcggccgcgcacgctctcggtcaccgagatcaagcatctgatccgtgaccccttc
cacatctatgccaagcgggtgctgcggctcacgccgctcaatcctctgcaacgtgcccca
gacgcgctgctgcgtggcacgctgatccaccgcgtgctggaggagttcgtcaaggaaagc
gtctctgatccggtgcaactcagtgtcgaggcgctgctgcgcaagaccgacgccatcatc
tgcgatccgcagatcgtgccctatccgacaacgcgccatctctggcgcgcgcggctggcc
aagatcgcgctctggttcaccgagaccgagcgcgcgagacaggcggtggccacgcccgcg
cattacgagatcatgggtcatggcgagattccgcagctcggttttaccctgcgcggcaag
gccgaccggatcgacatcgacgcgcgcggcggtgcgcatctttacgattacaagaccggc
gccgcccccagccccaaggagcagcgctatttcgacaagcagctgctgctcgaagccgcc
atggtcgagcgcggtgccttccgcgagcttcagccgcgccacaccgaacgcgcggtgttc
gtctcggtcgcggccagtcccaaggaggtgccggcgccgctcgacgaaatgccagccgcg
caggtctgggccgagttcgagacgctcatgacccgctgggcggaaccggagcgcggctat
accgcccgcgccgcgctgctcaaggaaaaggatgtgtccgaatacgatcacctcgcccgc
ttcggcgaatgggacgtgatcgacgaggcgcagcgcgaggtgctggaatga
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