Salipiger abyssi: Ga0080574_TMP2258
Help
Entry
Ga0080574_TMP2258 CDS
T04681
Name
(GenBank) Ykud domain-containing protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paby01002
]
Ga0080574_TMP2258
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paby01011
]
Ga0080574_TMP2258
Peptidases and inhibitors [BR:
paby01002
]
Cysteine peptidases
Family C82
Ga0080574_TMP2258
Peptidoglycan biosynthesis and degradation proteins [BR:
paby01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Ga0080574_TMP2258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Motif
Other DBs
NCBI-ProteinID:
APZ52592
UniProt:
A0A1P8UT72
LinkDB
All DBs
Position
complement(1631632..1632222)
Genome browser
AA seq
196 aa
AA seq
DB search
MTQKRFDRRAFLAAGAAVIGTPALAQNVNGAGTVEIERDLSQAVRRNISSFRTLDWQPHF
SSLNNGAILVDITSRALHYWEEDGTYHLYPCSVPLSEDLTRRGRTRVTLKDPAPDWRPTP
SMKQRNPEWPDYVGPGPDNPLGTRAMHLSWTYYRIHGTHDTRKIGRRSSNGCIGLYNEHI
EQLYGMAQVGTQVLLI
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaaacgttttgaccgccgggcctttctggccgcgggtgcagccgtgatcgga
acgccggcgctggcacagaatgtgaacggagcgggaaccgtcgagatcgagcgcgatctt
tcgcaggcggtgcgccgcaatatctcgagctttcgcacgctcgactggcagccgcatttc
tcgtcgctcaacaatggcgcgatccttgtggatatcacctcgcgcgcgctgcattactgg
gaagaggatggcacgtatcatctctatccctgctcggtgccgctgagcgaggatctgacg
cggcgtggtcgcacccgggtgacgctcaaggatccggcgcccgactggcgtccgacgccc
tcgatgaagcagcgcaatccggagtggccggactatgtcggccccggtcccgacaatccg
ctcggcacccgcgccatgcatctgagctggacctattaccgcatccacggcacccacgac
acgcgcaagatcgggcgccgctcgtccaatggctgcatcgggctttataacgagcatatc
gagcagctttacggcatggcgcaggtcggcacgcaggtgttgcttatttga
DBGET
integrated database retrieval system