Salipiger abyssi: Ga0080574_TMP2261
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Entry
Ga0080574_TMP2261 CDS
T04681
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paby03009
]
Ga0080574_TMP2261
Enzymes [BR:
paby01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Ga0080574_TMP2261
Ribosome biogenesis [BR:
paby03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ga0080574_TMP2261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
TRAM
Cons_hypoth95
Methyltransf_25
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
APZ52595
UniProt:
A0A1P8UT62
LinkDB
All DBs
Position
complement(1633570..1634793)
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AA seq
407 aa
AA seq
DB search
MEQVTIERLGHQGDGIAPGPVFVPGALPGELVEGEIADGVMASPRILTPSEMRVRAPCRH
AKSCGGCQLQHARDDFVEDWKTGVVRQALAAHALETEIRRCLTSKPQSRRRAAFSARRTK
KGALAGFHMKGSDVIVSVPDCLLVDPRLAAALPLVEALAVLGASRKGELSVLATVSLTGL
DIAVSGGKPLDAVLQSELAELARAHDVARIAWGDEVALTRRPAIQRMGVAEVVPPPGAFL
QATPGGEAALLDGVREIVGDAAHVVDLFAGCGTFALPLAETARVHAVEGDKAMTAALDKG
WRMAQGLRHVTAEARDLFRNPLLPDELARFDAAVIDPPRAGAEAQVAELARARVPRIAYV
SCNPVTFARDAAALDYAGYTLDWLRVVDQFRWSTHIELVACLTLTDR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggtcacgatcgaacggctggggcatcagggtgacggcatcgcgccgggccct
gtctttgtgcccggcgcattgcccggtgaattggtggaaggcgagatcgccgatggcgtg
atggcgtcgccgcgcattctcacaccgtcggagatgcgggtgcgcgcaccctgtcgccat
gcgaaaagctgcggcggttgccagttgcagcatgcgcgcgacgattttgtcgaagactgg
aagaccggcgtggtgcgtcaggcgctggcggcgcatgcgctggagaccgagatccggcgc
tgtctcacttcgaaaccgcaaagccgccgccgcgccgccttttccgcgcggcgcaccaag
aaaggcgcgctggccgggttccacatgaagggctcggacgtgatcgtttcggtgcccgac
tgcctgctggtcgatcccaggctcgccgccgcgctgccattggtcgaggcgctggcggtg
ctgggcgccagccgcaagggcgagctttcggtgctggcgacggtgagcctcaccgggctc
gacatcgcggtgagcggcggcaagccgctggacgcggtgctgcaatccgaactggcggag
ctggcccgcgctcatgatgtggcacgcatcgcctggggcgacgaagtggcgctgacccgg
cggcctgcgatccagcgcatgggcgtcgccgaggtggtgcccccgcccggcgccttcctt
caggccacgcccgggggcgaggcggcgttgctggacggtgtgcgcgaaatcgtcggcgac
gcggcgcatgtggtcgatcttttcgccggttgcggcaccttcgcgctgccgctggcggag
accgcgcgggtgcatgcggtcgagggcgacaaggcgatgaccgcggcgctcgacaagggg
tggcgcatggcgcaggggctgcgccatgtcaccgccgaggcgcgcgatctgttccgcaac
ccgctgctgccggacgagctggcgcgcttcgacgcggcggtgatcgacccgccgcgcgcc
ggtgccgaggcgcaggtggccgaactggcccgcgcccgcgtaccgcgcatcgcctatgtc
tcgtgcaacccggtcacctttgcccgcgatgcggcggcgctggattacgcgggctatacg
ctcgactggctgcgcgtggtcgatcagttccgctggtcgacccatatcgagctggtcgcc
tgcctgacgctcacggatcggtga
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