Salipiger abyssi: Ga0080574_TMP2266
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Entry
Ga0080574_TMP2266 CDS
T04681
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
paby
Salipiger abyssi
Pathway
paby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ga0080574_TMP2266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paby03019
]
Ga0080574_TMP2266
Enzymes [BR:
paby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Ga0080574_TMP2266
Messenger RNA biogenesis [BR:
paby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Ga0080574_TMP2266
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
APZ52600
UniProt:
A0A1P8UT77
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All DBs
Position
complement(1639673..1640821)
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AA seq
382 aa
AA seq
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MTRVGGDWLTCDSTQEVLAMLEAGGHVAYAVGGCVRNALMGVPVADVDIATDARPERVVQ
LAQAAGLKPVPTGIDHGTVTVVSEGIGHEVTTFRADVETDGRRAVVRYSDDIAEDAARRD
FTMNALYADARGTLFDPLGGLPDLEARRVRFIRDAGERIREDYLRILRFFRFSAWYGDPE
AGVDAEALAGIAANLDGLETLSRERVGQEVTRLLSAADPAPSVGVMEQVGVLTRVLPNAT
TQALAPLITVEEALGLAADPMRRLAVLGYFDGKALRLSRARQRQLELYQSLISADAGPAE
IAYRHGRDMAWDIAALRAASLYMPVAPDTGAEIAKGLGAVFPVKPRDLMPDLQGPALGAA
LRRLEARWIASGFALSRAELLA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgggtgggcggagactggctgacctgcgactccacgcaggaagtgctggcgatg
ctcgaagccggcggccacgtcgcctatgcggtcggcggctgcgtgcgcaacgcgctgatg
ggggtgccggtggccgatgtcgatatcgccaccgatgcccggcccgagcgggtggtgcag
ctggcgcaggcggcagggctgaaaccggttccgaccgggatcgaccatggcacggtgacc
gtggtgtccgaagggatcgggcacgaggtcaccacctttcgcgccgatgtcgagactgac
gggcgccgcgcggtggtgcgctattccgacgatatcgccgaggacgcggcgcggcgggat
ttcaccatgaacgcgctttacgccgatgcgcgcggcacgctgttcgatccgctgggcggg
ctgccggatctggaggcgcggcgcgtgcgtttcatccgcgatgccggcgagcgcatccgc
gaggactacctgcgcatcctgcgctttttccgtttcagcgcctggtatggcgaccccgag
gccggggtcgatgccgaggcgctggcagggattgccgccaatctcgacggtctcgaaacc
ctctcgcgcgagcgggtggggcaggaggtgacgcggctgctctccgcggccgatccggcg
ccctcggttggcgtgatggagcaggtgggcgttctgacccgggtgctgcccaatgccacg
acccaggcgctggcgccgctgatcaccgtcgaggaggcgctgggccttgccgccgatccg
atgcggcggctggcggttctgggctatttcgacggcaaggcgctgcgcctgtcgcgggcg
cgtcaacggcaacttgagctgtatcagagcctgatttccgccgatgcgggcccggcggag
atcgcttatcgccatggcagagacatggcctgggacattgccgccctgcgcgccgcgagc
ctctatatgccggtcgcgcccgataccggcgccgagatcgccaaggggctgggggcggtg
tttcccgtgaaaccccgcgatctgatgccggatcttcagggtccggcgctgggcgcggcg
ctgcgccggctcgaggcgcggtggatcgcctcgggctttgcgctcagccgcgccgagctg
cttgcatga
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