Salipiger abyssi: Ga0080574_TMP2351
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Entry
Ga0080574_TMP2351 CDS
T04681
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
paby
Salipiger abyssi
Pathway
paby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ga0080574_TMP2351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP2351
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ga0080574_TMP2351
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_27
ABC_tran
AAA_29
SbcC_Walker_B
AAA_16
ATPase_2
AAA_13
Motif
Other DBs
NCBI-ProteinID:
APZ52685
UniProt:
A0A1P8UTE3
LinkDB
All DBs
Position
1719125..1720231
Genome browser
AA seq
368 aa
AA seq
DB search
MSLYLSRLTLSHFRSHKRAAVDVDARPVAIYGPNGAGKTNLIEAVSLLSPGRGMRRASAQ
EMARRPEALGWKIGALLHGPEGTHEIAIRSEGGAARQVEIDGKPAPQTALGRIARVLWLI
PSMDRLWIEAPEGRRRFLDRMTLSFFPDHAEASLAYEKAMRERNRLLKEQIRDAHWYAAL
EGQMAASGAAIQRNRQAALDRLARAQEGAETSFPTAELALVSTEADIPATEADLRAALAE
SRFRDMAAGRTLIGPHRADLYGVFAAKGVPASDCSTGEQKALLISLILANARALSAEVGA
PPILLLDEVAAHLDANRRAALYDEICALGAQAWMTGTGPELFAELGPRAQLLPVSEEDGQ
SVVENPVE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtatctctcccgtctcaccctctcgcatttccgctcgcacaagcgcgcggcg
gtcgatgtggatgcgcggcccgtggcgatttacgggccgaacggcgcgggcaagaccaat
ctcatcgaagccgtgtcgctgctttcgcccgggcgcggcatgcggcgggcctcggcgcag
gagatggcgcggcggccggaggcgctgggctggaagatcggggcgctgctgcacgggccc
gagggcacgcatgagatcgccattcggtcggagggcggcgccgcgcgacaggtggagatc
gacggcaagcctgcgccgcagaccgcgctggggcggattgcacgcgtgctctggctgatc
ccgtccatggaccggctgtggatcgaggcgccggaggggcggcggcgctttctcgaccgc
atgacgctgagtttctttcccgaccacgctgaggcgtcgctggcctatgaaaaggccatg
cgcgagcgcaaccggctgctcaaggagcagatccgcgatgcgcattggtatgccgcgctc
gaagggcagatggccgcgagcggcgccgcgatccagcgcaaccggcaggcggcgctcgac
cggctggcgcgggcgcaggagggggcggagacctcctttcccacagccgagctggcgctg
gtctcgaccgaggcggatatccccgcgaccgaggcggatctgcgcgcggcgctggccgaa
agccggtttcgcgacatggctgccggacgcacgctgatcgggccgcatcgcgccgatctc
tacggggtctttgccgccaagggcgtgccggcctccgactgttccaccggcgagcagaag
gcgctgctcatttcgctgatcctcgccaatgcgcgggcgctttccgccgaggtcggtgcg
ccccccattctgctgctcgacgaggtggcggcgcatctcgatgcgaaccgccgcgcggcg
ctttacgacgagatctgcgcgctgggggcgcaggcctggatgaccggaacgggaccggaa
ctttttgccgagctggggccgcgcgcgcagcttttgccggtctcggaggaggatgggcaa
tccgtcgttgaaaaccccgtcgaatga
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