Salipiger abyssi: Ga0080574_TMP2422
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Entry
Ga0080574_TMP2422 CDS
T04681
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paby03021
]
Ga0080574_TMP2422
03009 Ribosome biogenesis [BR:
paby03009
]
Ga0080574_TMP2422
Transcription machinery [BR:
paby03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Ga0080574_TMP2422
Ribosome biogenesis [BR:
paby03009
]
Prokaryotic type
rRNA transcription factors
Ga0080574_TMP2422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
KH_NusA_C
KH_1
S1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
APZ52756
UniProt:
A0A1P8UTU2
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All DBs
Position
1799027..1800655
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AA seq
542 aa
AA seq
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MAITSANQLELLQTAEAVAREKMIDPALVIEAMEESLSRAAKSRYGSEMDIRVKIDRKTG
RATFTRVRTVVEDEELENYQAEMTVQQAKQYMADPKVGDQFIEEVPPVDMGRIAAQSAKQ
VILQKVREAERDRQYDEFKDRNGTIINGTVKREEYGNVIVDVGRGEAILRRNEKIGRESY
RPGDRIRCYIKDVRREARGPQIFLSRTAPEFMAELFKMEVPEIYDGIIEIKAVARDPGSR
AKIGVVSYDGSIDPVGACVGMRGSRVQAVVNELQGEKIDIIPWNEDMPTFLVNALQPAEV
SKVVLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGLDIDIMTEEEESQRRQKEFE
ERTKLFMDTLDLDEFFAQLLVAEGFTNLEEVAYVELDELLVIDGVDEGTAQELQTRAREF
LEEQARKALEHARELGVEDSLVDFEGLTPQMVEALAEDGVKTLEDFATCADWELAGGWTT
VDGERVKDDGLLEKFDVDLAEAQNLIMTARVLLGWVDPADLEAEAEDEADEDGDAEETGE
EV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcacctctgccaaccagcttgagcttttgcagaccgccgaggcggtggcccgc
gagaagatgatcgaccccgccctcgtgatcgaggcgatggaagagtcgctctcgcgcgcg
gcgaaatcgcgctacggctccgagatggacatccgcgtcaagatcgaccgcaagaccggg
cgggcgacctttacccgggtgcgcaccgtggtcgaggacgaggagctggagaactaccag
gccgagatgaccgtgcagcaggccaagcagtacatggccgatcccaaggtgggcgatcag
ttcatcgaagaggtgccgccggtcgatatgggccgcatcgccgcgcaatcggccaagcag
gtgatcctgcaaaaggtccgcgaagcggagcgcgaccgtcagtacgacgagttcaaggac
cgtaacggcaccatcatcaacggcaccgtcaagcgcgaggaatacggcaacgtcatcgtc
gatgtgggccgtggcgaggcgatcctgcgccgcaacgagaagatcggccgcgagagctat
cgccccggcgaccgcatccgctgctacatcaaggacgtgcgtcgcgaggcccgcggcccg
cagatcttcctgtcgcgcaccgcgccggaattcatggccgagctcttcaagatggaagtg
ccggagatctacgacggcatcatcgagatcaaggccgtggcccgcgacccgggctcgcgc
gccaagatcggcgtggtctcctatgacggctccatcgacccggtgggcgcctgcgtcggt
atgcgcggctcgcgcgtgcaggccgtcgtgaacgagcttcagggcgaaaagatcgacatc
atcccgtggaacgaggatatgccgaccttcctggtgaacgcgcttcagcccgccgaggtc
tccaaggtggtgctcgacgaggatgccgagcgcatcgaggtggtggtgccggacgagcag
ctgtcgctggccatcggccgtcgtggccagaacgtgcgtctggcgtcgcagctcaccggt
ctcgatatcgacatcatgaccgaggaagaagagagccagcgccgccagaaggaattcgag
gagcgcaccaagctcttcatggatacgctggatctcgacgagttctttgcccagcttctc
gtggccgagggcttcaccaatctcgaagaggtcgcctatgtcgagctcgacgaactgctg
gtgatcgacggagtcgacgagggcaccgcgcaggagcttcagacccgcgcccgcgaattc
ctcgaagagcaggcccgcaaggcgctggaacatgcccgcgagctgggtgtcgaggacagc
ctggttgacttcgaggggctcactccccaaatggtagaggcactggcagaagacggcgtg
aagacgctggaagatttcgccacctgcgccgactgggaactggccggcggctggaccacg
gtggatggcgaacgtgtcaaggacgacggtcttctcgaaaagttcgatgtggatcttgcc
gaggctcagaatctgatcatgaccgcgcgtgtccttcttggctgggtcgatcccgccgat
ctcgaagcggaggccgaagacgaggccgacgaagacggtgacgcggaagagaccggggaa
gaggtctga
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