Salipiger abyssi: Ga0080574_TMP253
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Entry
Ga0080574_TMP253 CDS
T04681
Name
(GenBank) peptide/nickel transport system substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
paby
Salipiger abyssi
Pathway
paby02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ga0080574_TMP253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paby02000
]
Ga0080574_TMP253
Transporters [BR:
paby02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Ga0080574_TMP253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
APZ50587
UniProt:
A0A1P8UMH7
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All DBs
Position
pPABY2:127505..129103
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AA seq
532 aa
AA seq
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MSPLKPNRRQILAGLAASVAIPALPQLARAQGSATLTVATGPVPVYLNAALSTGGGEAAV
SGKMMDGLLTYGEGMSPEPQLAESWEVSEDGLTVTFKLRPGVMWHDGEPFTSEDVRFSVM
EVLKVFHGRGRATFANVTEIETPDELTAVFKLTKPAPAMMSALNAQESPMLPAHVYVGTD
IQQNPANLSPIGTGPYKFVSYAPGETLVMERNPDYWDEGKPLIDQLIFRYISDGSTRAAM
LETGEADLVGSSQLPTIEILRFQSLDGFEVNGAGYEHTPSIHLCDFNLRRPQWQDKRVRQ
ALNFAIDNKWVAENVWFGLASPGTGPLHVQQKAFYTTEGVPNYDIDLEKAEALLDEAGYP
RGEDGWRFSMVIDAVQYGEEPPRAAEYMREQFREIGINAEARVNDFAAYVKRVYTDHDFD
LTSYTASAGADPAIGVQRFYWSKNIKDGVPFSNGSGYASDEADALLEAAAVETDLEKRKQ
LYADFQAVAMEDVPVIQLVYDAKKTITSTNVKDYVQGALSFFGNFADVHKDA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgctaaagccgaaccgccgacagatcctcgcgggtcttgccgcgtccgttgcc
attcccgccctgccgcagcttgcccgtgcccagggcagcgccacgctgaccgtcgccacc
ggcccggtgccggtctatctcaacgccgcgctcagcaccggcggcggcgaggcggcggtt
tcgggcaagatgatggacggcctgctgacctatggcgaaggcatgtcccccgagccgcag
cttgccgaaagctgggaggtctccgaggacgggctgaccgtcaccttcaagctgcgcccc
ggcgtgatgtggcatgacggcgagcccttcacctccgaagacgtgcgcttttcggtgatg
gaagtgctcaaggtgttccacggtcgcggccgcgccacctttgccaatgtcaccgagatc
gagactccggacgagctcacggccgtcttcaagctgaccaagccggcgcccgcgatgatg
tcggcgctgaacgcgcaggaaagcccgatgctgccggcgcatgtctatgtcggcaccgac
atccagcagaacccggccaacctctcgcccatcggcaccggcccctataaattcgtcagc
tacgcccccggcgagacgctggtgatggagcgcaaccccgattactgggacgagggcaag
ccgctgatcgaccagctgattttccgctacatctccgacggctcgacccgggctgcgatg
ctggagaccggcgaggccgatctggtgggctccagccagcttccgaccatcgagatcctg
cgcttccagagccttgacgggttcgaggtgaacggcgcgggctatgagcatacgccttct
atccacctgtgcgatttcaacctgcgccgtccgcaatggcaggacaagcgggtgcgccag
gcgctgaactttgccatcgacaacaaatgggtggccgaaaacgtttggttcggtctcgca
agccccggcaccggcccgctgcacgttcagcaaaaggcgttctacaccaccgagggcgtg
ccgaattacgatatcgacctggaaaaggccgaggcgctgctcgacgaggcgggctatccg
cgcggcgaggacggctggcggttctcgatggtgatcgacgcggtgcaatatggcgaagag
ccgccgcgcgccgccgagtacatgcgcgagcagttccgcgagatcggcatcaatgccgag
gcgcgggtgaacgatttcgccgcctatgtgaagcgggtctataccgatcacgatttcgac
ctgacgagctacaccgcctctgctggcgccgatccggcgatcggggtgcagcggttctac
tggtcgaagaacatcaaggacggcgtgccgttctcgaacggctcgggctatgccagcgac
gaagcggacgcgctgctcgaagcggcggcggtcgagaccgatctggaaaagcgcaaacaa
ctctatgccgatttccaggccgtcgcgatggaggacgtgccggtgatccagcttgtctac
gacgccaagaagacgatcacgagcaccaacgtgaaggattacgttcaaggcgcgctcagc
ttcttcggcaatttcgcagacgtgcataaagacgcatga
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