Salipiger abyssi: Ga0080574_TMP2971
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Entry
Ga0080574_TMP2971 CDS
T04681
Name
(GenBank) Ig-like domain (group 3)
KO
K20276
large repetitive protein
Organism
paby
Salipiger abyssi
Pathway
paby02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ga0080574_TMP2971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_3_3
Big_3_2
BapA_N
Motif
Other DBs
NCBI-ProteinID:
APZ53305
UniProt:
A0A1P8UV77
LinkDB
All DBs
Position
2380194..2384225
Genome browser
AA seq
1343 aa
AA seq
DB search
MNVIDFAIRTRAGAVSKGSVGGDGQGVLIDATNGNEVSLNLHQSDVARYERAGNDLVLTL
SDGRELVLEGYFGAGTPAQLYLSADGILQEVTLSESAGESLAVQYGHTETLGKWSPSEDL
IFFDRPALMVDNYEEEEVSMLGAGLLGSSLLGPIGAGAALLGGAAILGSGSGGSGGSGGG
NASAPAVPTVDDADIPIIVGGTEDPRIDITGTGEPGSTVVVTIGAVEETTVIEDNGAWGV
EFDGEDFPDDGSYEDVTVVVEDEDGTVTDLTGPPVTIDLTPPPLEITEGTAGTGDIVNAG
DQADGVTVAGTSEPGATVEIALGEHVASSVADEAGGWQITFDSSVVAEGEYLADIVVTAT
DAFGNSTALGDALDIDTVAPPLSIDPVGGDDLVNGAEAAEGFAITGSAEAGAPVVVTYDG
ESYETVAGEDGRWAVMVSAADVVAGEYSAGIEASTLDRAGNVTTTASTFSVDTETSVAFS
AAALTGDDLINAEELADGVLLTGSAEPGATVMVTVAGLSQEASVAADGRWSVTFNGLEAG
SYETVATVSATDAAGNTASAEHAFAVDTEISVTLDDGIGGDGTVNAAEAAEGVVLTGSAD
AGASVHIEIDGTGYETVADAAGQWRLALSAADIASGSYDSAVTVTATDAAGNSSVVTGSF
AVDTETSVAFAADPVEGDGIVNAVERADGVSLSGVAEPGAGVEVTLGTVTRAATVAADGG
WTVDFAAADIPEGEAVLPVSAIATDAAGNTASASGEIAVDTLVRDFALTSELGGADGIIS
ASEAAEGLTLTGSTEPGASVQVTLGGIARAATVAADGSWTVSYGADALPSGEQTVTLTAV
STDAAGNSETLTREIGIDTDAGLLTIDPAPLEGDDIVNAAEASDGVVVTGTSTPGQAVAV
TLGDAAMTVTTDADGVWSAAFAAAEIPAGTYTADITATITDAAGNTLTRSDGVGIDTEVV
NFGLSDDPIETDDVVNAAEAADGVTLTGTTEPGSSVTVTFEGTERAATVDAAGNWSASFT
AAEIPAGQYDAVAEVSTTDAAGNTASASARFAVDTYVDGLAVSDTPIAGDDIVNAEEARS
GFGLTGTVEPGSTVTLTVGGVEIAASVDTGGNWTADIPATAIPAEATELSMLIEAVDAAG
NTTSITETVAMDTLAPDTPDVESYTRDHTGLRGITLASGEGDVEIDTVVDEDGAEIADVA
FSSYQISGLGETAYSFNEVVPDGSHLVVSATDAAGNRSGTYLVVDDTTTSEVAMSNPLAQ
ALSQFNIETIDLQFAEESALTITESQLAALSSNGDTLIVEGGSDDSVTIVGAQAQGNDGE
GYNLFSLGDTDLRIDEDITNVVI
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgatcgatttcgcgatccgtacccgtgcgggtgcggtttcgaaggggagtgtc
ggtggcgatgggcaaggtgtcctgatcgacgcgacgaacggcaacgaggtttccctcaat
cttcatcagtcggatgtcgcgcgctacgagcgtgcgggcaacgacttagtgctgacactg
tccgacgggcgcgagctcgtgctcgaaggctatttcggggctggtacccctgcccagctc
tatctcagcgccgatggcattttgcaggaggtgacgttgtccgaaagcgccggcgagtcg
cttgccgtgcaatacggacacaccgagaccttggggaagtggagcccttccgaagatctg
atcttttttgatcgtccggcgctcatggtcgacaactatgaggaggaagaggtcagcatg
ctcggggccgggctgctcggatcgagcttgctggggccgatcggcgccggcgcggcgctg
ctcggtggcgcggcgatactgggcagcggctctggcggcagcggtggatctggcggggga
aatgcctcggcgccggcggttcccaccgtcgatgatgccgatatcccgatcatcgtgggc
ggcaccgaggatcctcgcatcgacattaccggcacgggcgagcccggctccaccgtggtg
gtcaccatcggcgccgtcgaggaaacgaccgttatcgaggataacggcgcctggggcgtt
gagttcgatggcgaggatttccctgatgatggcagctatgaggatgtcacggtggtcgtc
gaggacgaagacggcaccgtcaccgatctgaccggtccgccggtcaccatcgacctgacc
ccgccgccgcttgagatcaccgaaggcacagcgggaacgggcgatatcgtcaatgccggg
gaccaggccgacggcgtcaccgtcgcgggcacgtccgagcccggcgccacggtcgagatc
gcgcttggcgagcatgtcgccagcagcgttgccgacgaggcggggggctggcagatcacg
ttcgatagcagcgtcgtggccgagggcgaatatctcgccgatatcgtcgtgaccgccacc
gatgcctttggaaacagcacggcgcttggcgatgcgctggatatcgacacggtcgcaccg
ccgctgagcatcgacccggtgggcggcgacgatctggtgaacggggccgaggccgccgag
ggctttgccatcaccggcagcgcggaggccggcgcgccggttgtggtcacctatgacggc
gagagctatgagaccgtggcaggcgaggacgggcgctgggcggtcatggtgagcgccgcc
gatgtcgtggcgggcgaatacagcgccgggatcgaggccagcaccctggaccgtgccggc
aatgtcacgaccaccgccagcacgttttccgtggacaccgaaacctcggtggccttcagc
gcggcggctctcaccggagacgatctcatcaatgccgaggaactggcggacggcgtgctc
ctgaccggcagcgccgagccgggtgccaccgtcatggtcacggttgccgggctcagccag
gaggcgagtgtcgccgcggatggtcgctggagcgtcaccttcaacgggctcgaagcgggc
agctacgagaccgttgcaaccgtcagcgcgaccgatgccgccggcaataccgccagcgcc
gagcacgcctttgccgtcgataccgagatctcggtaacgctggacgacggcatcgggggg
gacggcacggtgaatgccgccgaggccgccgaaggcgtggtgctgacgggcagcgccgat
gccggggcgtcggtgcatatcgagatcgacgggaccggctacgagaccgtcgccgacgcc
gcgggccagtggcgccttgcgctttctgccgcggacattgcgtcggggagctatgacagc
gcggtgacggtcaccgcaaccgatgcggcgggcaacagctctgtcgtgaccggcagcttt
gccgtggataccgaaacctccgtcgcttttgcggcggacccggtcgagggagacggcatc
gtcaacgcagtggaacgtgccgatggcgtctcgctttccggcgtggccgagcccggcgcc
ggggtcgaggtcacccttggcaccgtcacccgcgcggcgacggtcgccgccgatggcggc
tggaccgtggatttcgcggcggcggatatccccgaaggagaggcggtgctgcccgtcagc
gcgatcgcaaccgacgcggcaggcaacactgccagcgccagcggcgagatcgccgtggac
acgctggtgcgggatttcgccctgacatccgagcttggcggcgccgatgggatcatcagc
gcttccgaggcggccgaagggctcaccctcaccggcagcaccgagccgggtgcgagcgtc
caggtcaccctcgggggcatcgcgcgcgcggcgacggttgccgccgatggcagctggacc
gtgagctatggcgccgacgcgctgccctcgggcgagcagacggtcacgctgaccgccgtg
tccaccgatgcggcgggcaatagcgagacgctgacccgggagatcgggatcgacaccgat
gccggcctgctgaccatcgacccggcgccgctcgaaggcgacgacatcgtcaacgccgcc
gaggcgtcggatggcgtggttgtcacgggcacttccacacccggccaggcggtcgcggtg
acactgggcgatgcggcgatgacggtgacgaccgatgccgatggtgtctggagcgcggcc
ttcgccgccgccgagattcccgccgggacctatactgccgatatcaccgcgacgatcacc
gacgcggcgggcaacacgttgactcgcagcgacggcgtcgggatcgacaccgaggtggtg
aatttcgggctctctgacgatccgatcgagaccgacgatgtggtcaatgccgcagaggcc
gccgatggcgtcaccctgaccgggaccaccgaacccggcagcagcgtgaccgtgaccttc
gagggcaccgaacgcgccgcgacggtggatgcggcgggcaactggagcgccagcttcacc
gccgccgagatcccggcgggccagtacgatgcggtggccgaggtttcgaccaccgatgct
gcgggcaacaccgccagcgccagcgcgcgttttgcggtcgacacctatgtggacgggctg
gctgtctccgacacgcccattgccggcgacgatatcgtcaatgccgaagaggcgcgcagc
ggttttgggctgaccggcacggtcgagcccgggtcgacggtcacactcacggtcgggggc
gtggagatcgcggccagcgtcgataccggcggcaactggacggcggatatccccgcgacc
gccatcccggcggaggcgaccgagctgtcgatgctgatcgaagcggtggacgcggcgggc
aacaccacgtcgatcaccgaaaccgtggcgatggatacgctggcacccgatacaccggat
gtggagagctacacccgggaccataccggcctgcgcggcatcacgctggcgagcggcgaa
ggcgatgtggagatcgacaccgtggtcgatgaggacggcgcggagatcgcggatgtggcg
ttcagctcttaccagatttcggggctgggcgagaccgcctattccttcaacgaggtggtg
ccggacggctcgcatctcgtggtgagcgcgaccgacgcggcaggcaaccgctcgggcacc
tatctggtggtggacgatacgaccacctccgaggtggccatgtccaacccgctggctcag
gcgctctcgcagttcaatatcgagacgatcgacctgcaattcgccgaggaaagcgcgctg
acgatcaccgagtcgcaactggcggccttgtcgtcgaatggcgacacgctgatcgtcgag
ggcgggtcggatgacagtgtgacgattgtcggtgctcaggctcagggcaatgacggagag
ggctacaacctcttctccctcggcgacaccgatctgagaattgatgaggacatcaccaac
gtggtgatttga
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