Salipiger abyssi: Ga0080574_TMP2998
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Entry
Ga0080574_TMP2998 CDS
T04681
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
paby
Salipiger abyssi
Pathway
paby00630
Glyoxylate and dicarboxylate metabolism
paby00680
Methane metabolism
paby01100
Metabolic pathways
paby01120
Microbial metabolism in diverse environments
paby01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ga0080574_TMP2998
09102 Energy metabolism
00680 Methane metabolism
Ga0080574_TMP2998
Enzymes [BR:
paby01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Ga0080574_TMP2998
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_Nqo3
Fer4_6
Fer4_8
Fer4_18
Fer4_2
Fer4_21
Fer4_16
Fer4_17
Fer4_4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
APZ53332
UniProt:
A0A1P8UVC2
LinkDB
All DBs
Position
complement(2410214..2413159)
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AA seq
981 aa
AA seq
DB search
METAGGRKMKDFIIPWDDRDMGTPAKSGKPVHLTIDGIDVTVPAGTSVMRAAAEAGIAVP
KLCATDSLDAFGSCRLCVVEIEGRRGTPASCTTPVHAGMVVHTQSSKVKKIRKGVMELYV
SDHPLDCLTCAANGDCELQDMAGMVGLRDVRYTPGDNHFDPSGSGARSQSEARLRMPEGE
ANPRYIAKDESNPYFTYDPSKCIVCSRCVRACEEVQGTFALTIEGRGFESRVSAGMAGDD
FLTSDCVSCGACVQACPTATLQEKSVAELGTPDRELVTTCAYCGVGCSFKAELNGDELVR
MTPWKHGKANRGHSCVKGRFAYGYAEHPDRILNPMIRDRIEDPWREVSWEEALSFAANRL
KGIQEKHGRKSVGVITSSRCTNEETYLVQKLTRAVFMNNNTDTCARVCHSPTGYGLGQTY
GTSAGTQDFDSVEQVDVAVVIGANPTDGHPVFASRLKKRLRQGAKLIVIDPRRIDLVKSA
HIAASHHLALTPGTNVAVVTALAHVIVTEKLYDEAFIRERCDWDEFMAYAEFVSEKRHAP
ESTALLTGVNAQELRAAARLYAQGGNGAIYYGLGVTEHSQGSTTVMGLANLAMMTGNIGR
DGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVKLPEVRKVFEDAWGVPIDPEPGLRIPN
MLDAAVDGTFRGLYCQGEDILQSDPDTKHVAAGLAAMDCVIVHDLFLNETANYAHVFLPG
SSFLEKNGTFTNAERRINRVRKVMAPKNSYEDWEVTQLLANAMGAGWAYTHPEQIMAEIA
ATTPSFAGVTYDLLEEKGSVQWPCNEEHPEGTPLMHVDGFVRGKGRFIVTEYVATDEKTG
PRFPLLLTTGRILSQYNVGAQTRRTANSVWHEQDLLEIHPHDAENRGLKEGDWVKLASRS
GETTLRAKITDRVSPGVVYTTFHHPDTQANVVTTDFSDWATNCPEYKVTAVQVAPSNGPS
DWQEDYAAQAERARRILPAAE
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgcgggaggacgaaagatgaaagatttcatcattccctgggacgaccgggat
atgggcacgcccgcgaaaagcggcaagcccgtgcatctgaccatcgacggcatcgacgtg
actgtgcccgccggcacctcggtgatgcgcgcggcggcggaggcgggcatcgcggtgccg
aagctctgcgccaccgacagtcttgatgccttcggctcctgccggctctgcgtggtcgag
atcgaggggcggcgcggcacgccggcctcctgcaccacgccggtgcatgcgggcatggtg
gtgcacacgcaatcctcgaaggtaaagaagatccgcaagggggtgatggagctttacgtc
tccgaccacccgctggactgcctgacctgcgccgccaatggcgattgcgaattgcaggac
atggccggcatggtggggctgcgcgacgtgcgctacacgccgggcgacaaccatttcgac
ccgtccggcagcggcgcgcgctcgcaatccgaggcgcggctgcggatgcccgagggcgag
gccaatccgcgctatatcgcgaaggatgagagcaacccctatttcacctacgatcccagc
aaatgcatcgtctgctcgcgctgcgtgcgggcctgcgaggaggtgcagggcacctttgca
ctgaccatcgagggccgcgggttcgagagccgcgtctcggcaggcatggccggcgacgat
ttcctgacctccgactgcgtgagctgcggcgcctgcgtgcaggcctgcccgaccgcaaca
cttcaggagaagagcgtcgccgagctgggcacgccggatcgcgagctggtgaccacctgc
gcctattgcggcgtcggctgttccttcaaggcggagctgaacggcgacgagctggtgcgc
atgacgccgtggaaacacggcaaggcgaaccgggggcatagctgcgtcaagggccgcttt
gcctatggctatgccgagcatcccgaccgcatcctcaacccgatgatccgcgaccgcatc
gaggatccgtggcgcgaggtgagctgggaggaggcgctgtcctttgcggcaaaccggctc
aagggcatccaggagaaacacgggcgcaagagcgtcggcgtgatcacctccagccgctgc
accaatgaggaaacctatctggtgcagaagctcacccgcgcggtgttcatgaacaacaac
accgatacctgcgcccgggtctgccattcgcccaccggctacgggctgggccagacctat
ggcacctccgccggcacgcaggatttcgactccgtcgagcaggtggacgtggcggtggtg
atcggcgccaacccgaccgacggccacccggtctttgcctcgcggctgaagaaacggctg
cgtcagggcgccaagctcatcgtcatcgacccgcgccgcatcgacctggtgaaatcggcg
catatcgcggcgtcgcatcacctggcgctgacgccgggcaccaatgtcgccgtggtgacc
gcgctggcgcatgtgatcgtgaccgagaagctctatgacgaggccttcatccgcgagcgc
tgcgactgggacgagttcatggcctatgcggagttcgtctccgaaaagcgccacgcgccc
gaaagcacggcgctgctcaccggcgtgaacgcacaggaactgcgcgcggcggcgcggctt
tatgcgcagggcggcaacggggcgatctattacgggctgggcgtgaccgagcacagtcag
ggctcgaccaccgtcatggggcttgccaacctcgccatgatgaccggcaatatcggtcgc
gacggcgtgggggtgaacccgctgcgcgggcagaacaacgtgcagggctcctgcgacatg
ggctccttcccgcacgagctgccgggctatcgccatgtcaagctgcccgaggtgcgcaag
gtctttgaagacgcctggggcgtgccgatcgacccggaaccggggctgcgcatcccgaac
atgctggatgccgccgtggacggcacgttccgggggctctactgccagggtgaggacatc
ctgcaatcggacccggacaccaagcatgtggcggcggggctggcggcgatggactgtgtc
atcgtgcatgacctcttcctcaacgagacggcgaactatgcgcatgtcttcctgcccggc
tcgtcctttctggagaagaacggcaccttcaccaatgccgagcgccgcatcaaccgcgtg
cgcaaggtcatggcgccgaagaacagctatgaggattgggaagtcacccagcttctggcc
aatgccatgggcgccggctgggcctatacccatcccgaacagatcatggccgagatcgcg
gccaccaccccgagctttgccggcgtgacctacgatctgctggaggagaagggctcggta
cagtggccctgcaacgaggaacatcccgagggcacgccgctcatgcatgtggacgggttc
gtgcgcggcaaggggcggttcatcgtcaccgaatacgtggcgacggatgaaaagaccggc
ccgcgcttcccgctgctgctgaccaccgggcgcatcctgtcgcagtacaatgtcggcgcg
cagacacggcgcaccgcgaacagcgtctggcacgagcaggatctgctggagatccacccg
cacgatgccgagaaccgcgggctgaaggagggcgactgggtgaagctcgccagccgctcg
ggcgagacgacgctgcgcgccaagatcaccgaccgggtgtcgcccggcgtggtctatacc
accttccaccacccggacacgcaggccaatgtggtcaccaccgatttctcggactgggcc
accaactgcccggaatacaaggtgacggcggtacaggtcgcgccctccaacgggccgtcg
gactggcaggaggattatgcggcgcaggccgagcgcgcgcggcgcatcctgccggcggcg
gagtaa
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