Salipiger abyssi: Ga0080574_TMP3071
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Entry
Ga0080574_TMP3071 CDS
T04681
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paby03009
]
Ga0080574_TMP3071
Enzymes [BR:
paby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Ga0080574_TMP3071
Ribosome biogenesis [BR:
paby03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ga0080574_TMP3071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
APZ53405
UniProt:
A0A1P8UVJ4
LinkDB
All DBs
Position
2478345..2478884
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AA seq
179 aa
AA seq
DB search
MLILFNKPFGVLSQFTDKGTADSPRATLSDYIDVPKVYPAGRLDRDSEGLLLLTDDGRLQ
ARIAHPKFKKPKTYLVQVEGDPQEAQLAQLRVGVTLKDGPTRPAKVRRLPAPDLWPRVPP
VRFRKTVPDAWLEVTITEGRNRQVRRMVAHVGLPCLRLVRWSVGDWTVAGLAPGEWRAL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgctgattctcttcaacaagccctttggcgtgctgtcgcagttcaccgacaagggcacc
gccgacagcccgcgtgccacgctgtcggattatatcgacgtgccgaaggtctatcccgcc
ggacggctcgaccgcgacagcgaggggcttttgctgctcaccgatgatgggcgcttgcag
gcccgcatcgcgcatccgaaattcaagaagcccaagacctatctggtgcaggtcgagggc
gaccctcaggaggcgcagctcgcgcagctccgcgtcggcgtgacgctgaaggacgggccg
acccggcccgccaaggtgcgccgcctgcccgcgcccgatctctggccgcgcgtgccgccg
gtgcggttccgcaagaccgtgcccgatgcctggctggaggtgacgatcaccgagggccgc
aaccgccaggtacggcgcatggtggcgcatgtgggcctgccctgcctgcggctggtgcgc
tggtcggtgggcgactggacggtcgccgggctggcacccggagaatggcgcgcgctctga
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