Salipiger abyssi: Ga0080574_TMP3113
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Entry
Ga0080574_TMP3113 CDS
T04681
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
paby
Salipiger abyssi
Pathway
paby03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Ga0080574_TMP3113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP3113
Enzymes [BR:
paby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Ga0080574_TMP3113
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Ga0080574_TMP3113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TACC_C
DUF6674
ARM_TT21_5th
RPW8
HU-CCDC81_bac_2
V-SNARE
Motif
Other DBs
NCBI-ProteinID:
APZ53447
UniProt:
A0A1P8UVM3
LinkDB
All DBs
Position
complement(2521082..2521324)
Genome browser
AA seq
80 aa
AA seq
DB search
MSDTPVEEMSFEQAMAELEQVVNQLERGEVPLDQSIDLYTRGAKLKAHCEKKLKDAEEKV
AQITLDAEGQPAGLKAAEGL
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgccggtcgaggagatgagtttcgagcaggccatggccgagctggaacag
gtggtgaaccagctcgaacgcggcgaggtgccgctggatcagtccatcgacctctatacg
cgcggcgccaagctcaaggcgcattgcgagaaaaagctcaaggacgccgaggagaaggtc
gcccagatcaccctagacgccgagggccagcccgccggtctgaaagccgccgaagggctc
tga
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