Salipiger abyssi: Ga0080574_TMP3188
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Entry
Ga0080574_TMP3188 CDS
T04681
Name
(GenBank) transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paby03000
]
Ga0080574_TMP3188
03036 Chromosome and associated proteins [BR:
paby03036
]
Ga0080574_TMP3188
Transcription factors [BR:
paby03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Ga0080574_TMP3188
Chromosome and associated proteins [BR:
paby03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Ga0080574_TMP3188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR
MarR_2
HTH_11
HVO_A0114
Fe_dep_repress
DUF7343
AsnC_trans_reg_3
HTH_Crp_2
HTH_5
LexA_DNA_bind
TrmB
HVO_A0261_N
HTH_34
HTH_1
HTH_20
Sigma70_r4_2
WHD_DprA
NirdL-like_HTH
HTH_28
Rrf2
HTH_39
DUF5805
DUF6387
LytTR
Motif
Other DBs
NCBI-ProteinID:
APZ53522
UniProt:
A0A1P8UVW0
LinkDB
All DBs
Position
2592118..2592576
Genome browser
AA seq
152 aa
AA seq
DB search
MELDDIDRRILRVLQKQGRMSNAELSEQVHLSPSACHRRVQRLETEGYIRGYVALLDARK
MNMPTTVFVEITLSAQADEVLEAFEKAVARVPDVLECHLMAGSADYILKVVAEDTEDFAR
IHRQYLTRLPGVAQMQSSFALRTVFKTTALPV
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgatgatatcgaccgccgcatcctgcgggtgctccagaagcaggggcggatg
tccaatgccgagctgtccgagcaggtgcatctctcgccttccgcctgccaccgccgggtg
cagcggctcgagacagagggctacatccgcggctatgtggcgctgctagacgcgcgcaag
atgaacatgcccaccacggtctttgtcgagatcaccctcagcgcccaggccgacgaggtg
ctggaggcgttcgaaaaggcggtggcgcgggtgccggacgtgctggaatgccacctgatg
gcgggcagcgccgattacatcctgaaggtcgtggcagaggataccgaggatttcgcccgc
atccaccgccagtacctgacccgcctgccgggtgtggcgcagatgcagtcgagctttgcc
ctgcgcaccgtcttcaagaccaccgccctgccggtctga
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