Salipiger abyssi: Ga0080574_TMP3476
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Entry
Ga0080574_TMP3476 CDS
T04681
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
paby
Salipiger abyssi
Pathway
paby00630
Glyoxylate and dicarboxylate metabolism
paby00710
Carbon fixation by Calvin cycle
paby01100
Metabolic pathways
paby01110
Biosynthesis of secondary metabolites
paby01120
Microbial metabolism in diverse environments
paby01200
Carbon metabolism
Module
paby_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ga0080574_TMP3476
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Ga0080574_TMP3476
Enzymes [BR:
paby01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Ga0080574_TMP3476
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
APZ53810
UniProt:
A0A1P8UWR8
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All DBs
Position
complement(2874931..2875350)
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AA seq
139 aa
AA seq
DB search
MRLKQGQFSFLPDLTDDDIRTQAQYAIDNGWAVSVEYTDDPHPRNSYWEMWGHPMFDNPD
AAAVVYEVNECRKEHGGKYIRVLAFDATAGWESIRMSFIVNRPAEEPGFRVVRQEGEGRS
IRYTVESYAVREPEGARYA
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgaaacaaggtcaattcagcttcctgcccgatctcaccgacgacgacatccgc
acgcaggcgcaatacgccatcgacaacggctgggcggtctcggtggaatataccgacgat
ccgcacccgcggaattcctactgggagatgtggggccacccgatgttcgacaatccggac
gcggcggcggtggtctatgaggtcaacgaatgccgcaaggagcatggcgggaaatatatc
cgcgtgctggccttcgacgcgaccgcgggctgggaatcgatccgcatgagcttcatcgtg
aaccgtcccgccgaggagcccggcttccgcgtggtgcggcaggaaggcgagggccgcagc
atccgctacacggtggaaagctacgcggtgcgcgaacccgagggggcgcgctacgcctga
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