Salipiger abyssi: Ga0080574_TMP3484
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Entry
Ga0080574_TMP3484 CDS
T04681
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paby03000
]
Ga0080574_TMP3484
Transcription factors [BR:
paby03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Ga0080574_TMP3484
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
MarR_2
HTH_8
I-HmuI_NUMOD-like
HTH_24
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
APZ53818
UniProt:
A0A1P8UWQ2
LinkDB
All DBs
Position
2884250..2885182
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AA seq
310 aa
AA seq
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MRRLASLTFKQLRALEAVERTGSISRAAEELGLTAPAVHSQLKALDATFGCAMLSREGAG
PFVATPEGRVLLQAHERADAGFRLALRRIDALQTGLAGTVVLGVVSTGKYFAPGIVARLR
KSCPEIEVLLQVGNRDTIISALQDGALDLAIMGRPPRDPPLQAISLGDHPHVLIAPPDHP
LAHAPRITPEDVLKETILMREPGSGTRILATRFLDRIGEGKTYERSEMGTNETIKQAVIA
GLGLALISYHTVVEELRSGRLVTLDLPGLPIVRHWFLLHPEDAPLSGAARTVWEFIAAEK
DSFLPRWPPA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgactggcctcgctgaccttcaaacagcttcgcgcgctggaagccgttgaaaga
acgggctcaatttcccgcgcggcggaagagctcgggctcacggcgccggcggtgcacagc
cagctcaaggcgctggatgcgactttcggatgcgccatgctgtcgcgggagggggcgggg
ccgtttgttgcgacgccggagggcagggtgcttttgcaggcccatgaaagggccgatgcc
gggtttcgcctggcgctgcgccgaatcgatgcgctccagaccgggctggcgggcacggtg
gtgctgggggtggtctcgacggggaaatatttcgcgcccggcatcgtggcgcggctgcgc
aagagctgccccgagatcgaggtgctgttgcaggtcggcaatcgcgacacgatcatctcg
gcgcttcaggacggggcgctggatctggcgatcatggggcggccgccgcgcgatccgccg
ctccaggcgatttcgctgggcgatcacccgcatgtgctgatcgcgccgccggatcatccg
ctggcccacgcgccgcgcatcacccccgaggatgtgctgaaggaaaccatcctgatgcga
gagccgggatcgggcacacgcatcctggcgacccggtttctcgaccggatcggcgagggc
aagacctatgagcgctccgagatgggcaccaatgagaccatcaagcaggcggtgatcgcc
gggctggggctggcgctgatctcttatcacacggtggtggaggagctgcgcagcgggcga
ctggtgacgctggatctgccggggctgccgatcgtgcggcactggttcctgctgcatccg
gaggacgcgccgctcagcggggcggcccgcaccgtgtgggagttcatcgccgccgagaag
gacagtttcttgccgcgctggcccccggcctga
DBGET
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