Salipiger abyssi: Ga0080574_TMP3537
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Entry
Ga0080574_TMP3537 CDS
T04681
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
paby
Salipiger abyssi
Pathway
paby03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ga0080574_TMP3537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP3537
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ga0080574_TMP3537
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ga0080574_TMP3537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
UB2H
DUF87
AAA_16
AAA
eIF3_p135
Kinesin
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
APZ53871
UniProt:
A0A1P8UWU4
LinkDB
All DBs
Position
complement(2937998..2940196)
Genome browser
AA seq
732 aa
AA seq
DB search
MPYAHSDKSAPEMHAPAPDVREREKLEGGKRFVMQTEFQAAGDQPTAIAELSTGVSDGER
NQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYY
DYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLIAGNEYDQRKVMADLVTQQYRRNDQAFQRGSFRVRGDSLEIWPAHLEDRAWK
LSFFGEELEAITEFDPLTGQKTGSFERIRVYANSHYVTPKPTMNQAVVQIKKELRQRLDQ
LVSEGKLLEAQRLEQRTNFDIEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNA
IVFADESHVTVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVS
ATPAAWELEQAGGVFTEQVIRPTGLLDPQVEIRPVEMQVDDLLDEVRKVTADGFRTLCTT
LTKRMAEDLTEYMHEQGIKVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERALAETERRRV
KQIAYNEEHGITPATVKKNVEDILAGLYQGDVDMNRVTAVVDKERAGANLETVLEGLRTD
MRKAAENLEFEEAARLRDEIKRLEAVDLAVHDDPLARQSAVEAASDAAVKSSGRSTAGRP
GQRGGNVKRRKR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccctatgcccattccgacaagtccgcccccgagatgcacgcccccgctcccgatgtg
cgcgagcgcgaaaagctcgaaggtggcaagcgctttgtcatgcagacagagttccaggcg
gcgggcgatcagcccaccgccatcgccgagctgtcgacaggcgtgagcgacggcgagcgc
aatcaggtgctgctgggcgccaccggcaccggcaagaccttcaccatggccaaggtgatc
gaggaaacccagcgcccggcgatcatcctcgcccccaacaagacgctggcggcgcagcta
tacggcgagttcaagggcttcttcccggacaacgcggtggagtatttcgtcagctactac
gactattaccagcccgaggcctatgtggcgcgctcggacacctacatagaaaaggaaagc
cagatcaacgagcagatcgaccggatgcgccactcggccacccgtgcgctgctcgaacgc
gacgatgtgatcatcgtggcctcggtctcctgcatctacggcatcggctcggtcgagacc
tacggcgcgatgacccaggatctgattgccggcaacgaatacgatcagcgcaaggtgatg
gccgatctggtgacccagcaataccggcgcaacgaccaggcgtttcagcgcggctcgttc
cgggtgcgcggggattcgctggagatctggcccgcccacctcgaagaccgggcgtggaag
ctgagctttttcggggaagagcttgaggccattacggaattcgacccgctcaccggccag
aaaaccggcagcttcgagcgcatccgggtctatgccaactcgcactatgtgacgccgaaa
ccgacgatgaatcaggcggtggtgcagatcaagaaagagctgcgccagcggctcgaccag
cttgtgagcgagggcaagctgctggaggcgcagcggctggagcagcgcaccaatttcgat
atcgagatgctggaggccaccggcgtctgcaacggcatcgagaactattcgcgctatctc
accggccgtgcgccgggcgagccgccgcccacgctgttcgaattcatccccgacaatgcg
attgtctttgccgatgaaagccacgtcaccgtgccgcagatcggtggcatgtaccggggc
gactaccggcgcaagttcacgctcgccgagcacgggttccggctgccctcctgcatggac
aaccgcccgctcaaattcgaggaatgggacgcgatgcgcccgcaatcggtgtttgtctcg
gccaccccggcggcgtgggagctggagcaggccggcggcgtcttcaccgaacaggtgatc
cgtcccaccgggctgctggatccgcaggtcgagatccgccccgtcgagatgcaggtggac
gatctgctcgacgaggtccgcaaggtcacggcggacggcttccgcacgctctgcaccacg
ctcaccaagcgcatggccgaggatctgacggaatatatgcacgaacagggcatcaaggtg
cgctacatgcattccgatatcgacacgatcgagcggatcgagatcctgcgcgatctgcgg
ctcggcgccttcgacgtgctgatcggcatcaacctgctgcgcgaagggctggatattccc
gaatgcgggctggtggccattctggacgcggacaaggagggcttcctgcgctccgagacc
tcgctgatccagaccatcgggcgcgcggcacggaatgccgagggccgcgtcatcatgtat
gccgaccgcatcaccggctcgatggagcgcgccctggccgagaccgagcggcgtcgggtg
aagcagatcgcctataacgaggagcacggcatcacaccggcgacggtgaagaagaatgtc
gaggacattctcgccgggctctatcagggcgatgtggacatgaaccgggtgacggcggtg
gtcgacaaggagcgcgccggcgccaatctggaaacggttctggaggggctgcgcacggat
atgcgcaaggccgccgagaatctggaattcgaggaggccgcccggctgcgcgacgagatc
aagcggctggaggcggtggatcttgccgttcacgacgacccgctggcgcgccaatcggcg
gtcgaggcggcgtcggacgcggcggtcaagtcatccggccgctccacggcgggccgcccg
ggccagcgcggcgggaatgtgaagcggcggaagcggtag
DBGET
integrated database retrieval system
