Salipiger abyssi: Ga0080574_TMP3652
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Entry
Ga0080574_TMP3652 CDS
T04681
Name
(GenBank) DNA polymerase-3 subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
paby
Salipiger abyssi
Pathway
paby03030
DNA replication
paby03430
Mismatch repair
paby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ga0080574_TMP3652
03430 Mismatch repair
Ga0080574_TMP3652
03440 Homologous recombination
Ga0080574_TMP3652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paby03032
]
Ga0080574_TMP3652
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP3652
Enzymes [BR:
paby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ga0080574_TMP3652
DNA replication proteins [BR:
paby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ga0080574_TMP3652
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ga0080574_TMP3652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
APZ53986
UniProt:
A0A1P8UXC3
LinkDB
All DBs
Position
complement(3058025..3059431)
Genome browser
AA seq
468 aa
AA seq
DB search
MSKLGLRLRIFLFFGLLALGGSAAVLLALWAGHARVAETSVADGFVFAAIVAVLALLALS
VGVWLLFDENVAKPIEKLAAEMRMRAHAGVSREVDTHAARYLGDLAHAARAVSERLTEGT
LDSAQRVALETERLSIEKARLTALLTEIPVAMILVSPRGQIVLYDGQAAEVLAQLHVPRL
NAPLSDYFEASGLEAAVTRMHKTGREVRFTAEGVDGAQSYDARLKPMEGGGYMMVIEGAE
THMPPEAERPLVYDFDLLNHDAPASIEDTPLSALSYTVFDTETTGLLPHKDEVVQIGAVR
VLNGRIVPGEVIDQLVDPGVPIPPSSTRVHKVTDAMVRGKPDIAEAGRRFHRFAKGSVIV
AHNAPFDMAFLRRHRDRMGVVWDHPILDTVLLSAVLFGASQTHTLDALCERLGVEIPAAL
RHTALGDAHATAQVLVRMLPMLEARGMTRFGAVLDETRKHGRLLEDLN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctcggcctgcggctgcggatcttcctgttcttcgggctgctcgcgctcggc
ggcagcgcggcggtgctgctggcgctctgggccgggcatgcgcgcgtggcggaaacctcc
gtcgccgacggctttgtctttgccgccatcgtcgcggtgctggcgctgctggcgctcagc
gtcggggtctggctgctcttcgacgagaatgtcgccaagcccatcgagaagctcgccgcc
gagatgcgcatgcgcgcccacgccggggtatcgcgcgaggtcgacacccatgcggcgcgc
tatctcggcgatctcgcccatgccgcccgcgcggtctccgagcggctgaccgagggtacg
ctcgacagcgcgcagcgggtggcgttggagaccgagcggctgagcatcgaaaaggcccgg
ctcaccgcgctgctgaccgagatcccggtggcgatgatcctggtgagcccgcgcgggcag
atcgtgctctatgacggtcaggcggcggaggtgctggcacagctgcatgtgccacgcctg
aacgcgccgctgtcggattatttcgaggcatcggggctggaggccgcggtgacccggatg
cacaagaccgggcgcgaggtgcgctttaccgccgagggggtggacggcgcgcagagctat
gacgcgcggctgaagccgatggagggcggcggctacatgatggtgatcgagggtgccgag
acgcacatgccgccagaggccgagcgcccgctggtctatgatttcgacctgctgaaccat
gatgcccccgccagcatcgaggacacgccgctctcggcgctgagctacacggtgttcgat
accgagaccacggggctcttgccgcacaaggacgaggtggtgcagatcggcgcggtgcgg
gtgctgaacgggcgcatcgtgcccggcgaggtgatcgaccagctggtcgatccgggggtt
ccgatcccgcccagctcgacccgggtgcacaaggtgaccgacgccatggtgcgcggcaag
cccgatatcgccgaggccgggcggcgctttcaccgctttgccaagggctcggtcatcgtg
gcgcataacgcgcccttcgacatggccttcctgcgccgccaccgcgaccgcatgggcgtg
gtctgggaccatccgatcctcgatacggtgctgctctcggcggtgctgttcggcgccagc
cagacccacacgctggatgcgctttgcgagcggctgggcgtcgagatcccggcggcgctg
cgccacaccgcgctgggggatgcccatgccacggcgcaggtgctggtcaggatgctgccg
atgctggaggcgcgcgggatgacccgtttcggcgcggtgctggacgagacgcgcaaacat
ggccggctgctggaagacctgaactga
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