Salipiger abyssi: Ga0080574_TMP3890
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Entry
Ga0080574_TMP3890 CDS
T04681
Name
(GenBank) hypothetical protein
KO
K17713
outer membrane protein assembly factor BamB
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paby02000
]
Ga0080574_TMP3890
Transporters [BR:
paby02000
]
Other transporters
Pores ion channels [TC:
1
]
Ga0080574_TMP3890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_FAM234A_B
Motif
Other DBs
NCBI-ProteinID:
APZ54224
UniProt:
A0A1P8UXU9
LinkDB
All DBs
Position
3303422..3304768
Genome browser
AA seq
448 aa
AA seq
DB search
MTGAGHLRITTITAGLLGLTMLSACEEPEIILAGERYGTREVLQTEAPTDEAAPENTARA
IALPAASRNADWAQSPVSPFARVGNAALGNSLNRVFAVNIGAGDSRRERLNVDPVVAGGR
IFTMDAEHTLSAVSSAGEILWQKSMVPERDAAKQAQGGGLAAADGRIYVASGFGRLTALD
AATGQEIWTQRLGGTATGAPTVSGGLVYVTSDDSRGWAIEAEDGRVRWQIEGIEDIHNVA
GAPPPALSGDKVIFAFGSGAVQAAFRQGGLRLWSADVAGTRNGTALASISDITGAPVISG
ERVFVGNHSGRVVGFNLGSGERLWTARMGARGPVWPAGDSVFFVSDVNALVRLDAATGEQ
IWSVDLPGYEPVRRPQRKRDSAFAHHGPVLAGGRLVLASSDGLLRSFNPENGALLSAIEI
PGGATTAPAVAGGTLYVVTKKGQLVAYR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacgggggcagggcatttgcgtatcaccacgatcacggcggggctgctcgggctgacg
atgctgtccgcctgcgaggagccggagatcattctcgccggcgaacgctacggcacgcgc
gaggtgctgcaaaccgaagcaccgacggacgaggccgcgccggaaaacaccgcgcgcgcc
atcgcgctgccggcggcaagccgcaacgcggactgggcgcagagcccggtctcgcccttt
gcgcgggtcggcaacgcggcgctcggcaattcgctgaaccgggtgtttgcggtgaatatc
ggcgcgggcgacagccgccgcgagcggctcaatgtcgatccggtggtcgccggcggccgc
atcttcaccatggatgccgagcatacgctcagcgcggtcagctccgcgggcgagatcctc
tggcagaagagcatggtgcccgaacgcgacgcggccaagcaggcgcagggcggcgggctc
gccgccgccgatggccggatctatgtcgcctcgggctttggccggctgacggcgctcgac
gccgccaccggtcaggaaatctggacacagcgtctcggcggcaccgccaccggcgccccg
accgtctcgggcgggttggtctacgtcacgtctgatgacagtcgcggctgggcgatcgag
gccgaggatgggcgcgtccgctggcagatcgagggcatcgaggacattcacaacgtggcc
ggcgcgccgccgccggcgctgagcggagacaaggtgatctttgccttcggcagcggcgcg
gtgcaggcggccttccgtcagggcgggctgcggctctggagcgccgatgtggcgggcacg
cgcaacggcacggcgctggcgtcgatcagcgatatcaccggggcgccggtgatctccggc
gagcgggtctttgtcggcaaccattcgggccgcgtcgtgggcttcaacctcggcagcggc
gagcggctctggacggcgcgcatgggcgcgcgcgggccggtctggccggcgggcgactcg
gtgttcttcgtctccgacgtgaacgcgctggtgcggctcgacgccgccaccggcgaacag
atctggtcggtggacctgccgggctacgagccggtgcggcgtccgcagcgcaagcgcgac
agcgcctttgcgcatcacgggccggttctggccggcgggcgtctggttctggcctcctcg
gacgggctgctgcgcagcttcaacccggagaacggcgcactgctctcggcgatcgagatc
ccgggcggtgccaccaccgcgccggcggtggcgggcggcacgctctacgtggtgaccaag
aagggccagctcgtcgcctatcgctga
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