Salipiger abyssi: Ga0080574_TMP3939
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Entry
Ga0080574_TMP3939 CDS
T04681
Name
(GenBank) transcriptional regulator, AsnC family
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paby03000
]
Ga0080574_TMP3939
Transcription factors [BR:
paby03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Ga0080574_TMP3939
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
NirdL-like_HTH
HTH_11
PrgU
HTH_5
HTH_Crp_2
HTH_36
HTH_31
HTH_27
MarR
DUF4211
Motif
Other DBs
NCBI-ProteinID:
APZ54273
UniProt:
A0A1P8UY08
LinkDB
All DBs
Position
3349510..3349965
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AA seq
151 aa
AA seq
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MQIDATDRKILRELQQDAGRSLDDIARAVGSSKTPVWTRIRKLREAGIIGPQVVIADPDK
LGFEACFFVLIRTSEHDSDWQQRFLNAVRARPEVMEAHRLAGDIDYILKVRVPNARAYDV
FYQSLISEVKVHNVTALLSMEEIKATTALPV
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgacgcgaccgaccggaaaatccttcgcgagcttcagcaggacgcgggtcgt
tcgctcgacgatatcgcccgcgcggtgggctcgtccaagaccccggtctggacccggatt
cgaaagctgcgcgaggccggcatcatcgggccgcaggtggtgatcgccgatccggacaag
ctgggcttcgaggcctgtttctttgtgctgatccgcacctccgagcacgattccgactgg
cagcagcgctttctcaacgcggtgcgcgcccggcccgaggtgatggaggcgcaccggctg
gcgggcgatatcgactatatcctcaaggtgcgggtgccgaacgcgcgcgcctatgacgtg
ttctaccagtcgctgatttccgaggtgaaggtgcataacgtcacggcgctgttgtcgatg
gaggagatcaaggcgacgacggcgctgccggtgtaa
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integrated database retrieval system
