KEGG   Salipiger abyssi: Ga0080574_TMP3980
Entry
Ga0080574_TMP3980 CDS       T04681                                 
Name
(GenBank) exodeoxyribonuclease-3
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
paby  Salipiger abyssi
Pathway
paby03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:paby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Ga0080574_TMP3980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paby03400]
    Ga0080574_TMP3980
Enzymes [BR:paby01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Ga0080574_TMP3980
DNA repair and recombination proteins [BR:paby03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Ga0080574_TMP3980
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: APZ54314
UniProt: A0A1P8UY41
LinkDB
Position
complement(3388990..3389772)
AA seq 260 aa
MKIASFNINGVKARIAALSDWLDEAQPDVALLQEIKSVDEAFPREHFEERGYQVETHGQK
GFNGVAILSKLPLEDVTRGLPGDDEDEQARWIEATVVGDTHALRLCGLYLPNGNPAPGPK
YDYKLAWMERMEARARALLAEEMPFLMAGDYNVIPQAEDAAKPEAWEEDALYLPQTRAAF
RRILNLGFTEAFRTRHPGPGHYSFWDYQAGAWQRNNGIRIDHVLLSPQAADLMTDVQIDR
EIRGREKPSDHVPVWVDLAC
NT seq 783 nt   +upstreamnt  +downstreamnt
atgaagatcgccagcttcaacatcaacggcgtcaaggcacgcatcgcggccctgagcgac
tggctcgacgaggcccagcccgatgtggcgctgctccaggagatcaaatccgtcgacgag
gccttcccccgcgagcatttcgaagagcgcggctatcaggtcgaaacccacggtcagaaa
ggcttcaacggcgtcgcgatcctgtcgaaactgccgctggaggacgtcacgcgcggcctg
cccggcgatgacgaggacgagcaggcgcgctggatcgaggcgacggttgtgggcgacacc
cacgcgctgcggctctgcgggctttacctgcccaacggcaacccggcgccggggccgaaa
tacgactacaagctcgcctggatggaacgcatggaggcccgcgcccgcgccctgctggcc
gaggagatgccgtttctcatggccggcgattacaacgtgattccgcaggcagaggacgcg
gcgaaacccgaggcctgggaagaggatgcgctctacctgccgcagacccgcgccgccttc
cgccggatcctcaacctgggcttcaccgaggcgttccggacccgccaccccggccccggg
cactactcgttctgggattaccaggcaggcgcctggcagcgcaacaatggcatccgcatc
gaccatgtgctgctgtcgccgcaggccgcagacctgatgaccgatgtgcagatcgaccgc
gagatccggggccgcgaaaaaccctccgaccacgtcccggtctgggtcgatctggcctgc
tga

DBGET integrated database retrieval system