Salipiger abyssi: Ga0080574_TMP400
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Entry
Ga0080574_TMP400 CDS
T04681
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
paby
Salipiger abyssi
Pathway
paby00260
Glycine, serine and threonine metabolism
paby00460
Cyanoamino acid metabolism
paby00630
Glyoxylate and dicarboxylate metabolism
paby00670
One carbon pool by folate
paby00680
Methane metabolism
paby01100
Metabolic pathways
paby01110
Biosynthesis of secondary metabolites
paby01120
Microbial metabolism in diverse environments
paby01200
Carbon metabolism
paby01230
Biosynthesis of amino acids
paby01240
Biosynthesis of cofactors
Module
paby_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ga0080574_TMP400
09102 Energy metabolism
00680 Methane metabolism
Ga0080574_TMP400
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ga0080574_TMP400
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Ga0080574_TMP400
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Ga0080574_TMP400
Enzymes [BR:
paby01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Ga0080574_TMP400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
DPAGT1_ins
Motif
Other DBs
NCBI-ProteinID:
APZ50734
UniProt:
A0A1P8UMW2
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All DBs
Position
pPABY1:96983..98257
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AA seq
424 aa
AA seq
DB search
MFDHLPKTRIGDAEIASAVAEELDRQQSQIELIASENIVSADVMAAQGSVLTNKYAEGYP
GKRYYGGCEFVDKVETVAIERLKQLFGAGFANVQPHSGAQANQAVFLALLQPGDRIMGLN
LAHGGHLTHGSPVTMSGKWFDVVSYEVDADSHLIDMEKVREKALETKPKLIVAGASAYPR
KIDFEGFRKIADEVGAYLMVDMAHYAGLIAGGHYPNPVPHAHVVTSTTHKTLRGPRGGVI
LTNDEALAKKLNSAVFPGNQGGPLMHVIAAKAVAFGEALQPSFTEYGAQVIENARALADV
LQVGGLGIVSGGTDCHMVLVDLQPKGVTGKVAEIALERAGLTCNKNSIPNDPQKPFVTSG
IRLGTSAGTTRGFKEAEFELIGSLILKVIDALSLNPEGDAEVEAAVREEVRALCDSFPIY
SVEG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccatcttcccaagacccgtatcggtgatgccgagatcgcctctgccgtggcc
gaggagctcgaccgccagcagagccagatcgagctgatcgcctctgaaaacatcgtctcc
gccgatgtcatggcggcgcagggctctgtgctcaccaacaaatatgccgaaggctacccg
ggcaagcgctattacggcggctgcgaattcgtcgacaaggtcgagaccgtggccatcgaa
cggctcaagcagctcttcggcgcgggctttgccaacgtgcagccgcattccggcgcgcag
gccaaccaggcggtgttcctggcgctgctgcaaccgggcgaccgcatcatgggcctgaac
ctcgcccatggcggccacctcacccacggctcgccggtcaccatgtcgggcaagtggttc
gacgtcgtttcctacgaggtcgatgccgacagccacctgatcgacatggaaaaggtgcgt
gaaaaggcgctggagaccaagcccaagctgatcgtcgcgggcgcctcggcctatccgcgc
aagatcgacttcgaaggcttccgcaagatcgcggacgaggtcggcgcctacctgatggtg
gacatggcccattatgccggtctcattgccggcgggcattacccgaacccggtgccgcat
gcccatgtggtgacctcgaccacccacaagacgctgcgcggcccgcgcggcggggtgatc
ctgaccaatgacgaggcgctggcgaaaaagctgaactcggctgtcttcccgggcaaccag
ggcggaccgctgatgcatgtgatcgcagccaaggccgtggcctttggcgaggcgctgcaa
ccctccttcaccgagtacggcgcgcaggtcatcgagaacgcccgggcgctggccgatgtg
ctgcaggtgggcggtctgggcatcgtttcgggcggcaccgactgccacatggtgctggtc
gacctgcaacccaagggcgtcaccggcaaggtcgccgagatcgcgctggagcgcgcgggc
ctgacctgcaacaagaactcgatccccaacgatccgcagaaacccttcgtcacctcgggc
atccgcctgggcacctcggcgggcaccacgcgcggcttcaaggaggccgagttcgagctg
atcggcagcctgatcctcaaggtcatcgacgcgctgtcgctgaaccccgagggcgacgca
gaggtcgaagccgccgtgcgcgaggaagtccgcgcgctctgcgacagcttccccatctac
agcgtcgaaggctga
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