Salipiger abyssi: Ga0080574_TMP4129
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Entry
Ga0080574_TMP4129 CDS
T04681
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP4129
Enzymes [BR:
paby01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Ga0080574_TMP4129
DNA repair and recombination proteins [BR:
paby03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Ga0080574_TMP4129
Prokaryotic type
Ga0080574_TMP4129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APZ54463
UniProt:
A0A1P8UYJ2
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All DBs
Position
3540810..3542165
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AA seq
451 aa
AA seq
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MHAAGQAGRPVIPVFIRDHTVDALGAAPKWRLGLGLEVFAKALAEKGSRLIFCAGPAREV
LDALVDETGAGAVWWQRAYDPAAVERDTDVKSALKELGVDARSFAGHLLFEPWSVETKQG
GFYKVYTPFWRAVCGTDVPEPLPAPSKLPAPARWPESDALEDWQLGAAMRRGAAVVRPYV
QLGEAAAQGRLGGFVSGRIAEYKDGRNMVAEDGCSNLSENLSLGEISPAQCWHAGKRAQA
AGKPGAETWLKELVWREFAYHLMWHTPHLLEDNWREEWRAFPWNEDERRREVIAWKRART
GIPFVDAALREMYVTGRMHNRARMIVASYLTKHLMCHWKIGMDWFADCLIDWDPAANALG
WQWTAGSGPDAAPYFRVFNPITQREKFDPDRAYVSRWIAEGQRRPPETALSYFDAIPESW
AMAPGDAYPEPVVSAEDGRKAALAAYEARDF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgcggcggggcaggcggggcgtccggtgatcccggtcttcatccgcgaccacacg
gtcgatgcgctcggtgccgcgccgaaatggcggctggggctggggctggaggtctttgcc
aaggcgctggcggagaagggcagccggctgatcttttgcgcggggcctgcgcgcgaagtg
ctcgacgcgctggtggacgagaccggcgcgggcgcggtctggtggcagcgcgcctacgac
ccggcggcggtcgagcgcgacaccgatgtgaaatccgccctcaaggagcttggcgtcgat
gccaggagctttgccggccatctgcttttcgagccctggagcgtcgagaccaagcagggc
gggttctacaaggtctatacgccgttctggcgggcggtctgcggcacggatgtgcccgaa
ccgctgccggcgccgtcaaagctgcctgctcccgcacgctggccggaaagcgatgcgctg
gaggattggcaactcggcgctgcgatgcggcggggggctgcggtggtgcgtccctatgtc
cagctcggcgaggcggcggcgcaggggcggctcggcggctttgtctcggggcgcatcgcc
gagtacaaggacgggcgcaatatggtggccgaggacggctgctccaacctgtcggaaaat
ctcagcctgggcgagatcagcccggcgcaatgctggcacgccggcaagcgcgcgcaggcg
gcgggcaagcccggtgccgagacctggctgaaggagctggtctggcgcgaattcgcctat
cacctgatgtggcacacgccgcatctgctggaggacaactggcgcgaggaatggcgggcc
ttcccctggaacgaggacgagcgccgccgcgaggtcatcgcctggaaacgcgcccgcacc
ggcattccctttgtcgatgcggcgctgcgcgagatgtatgtcaccgggcggatgcacaac
cgcgcccggatgatcgtcgcaagttacctcaccaagcacctgatgtgccactggaaaatc
ggcatggactggtttgccgactgcctgatcgactgggatccggcggcgaatgcactcggc
tggcaatggaccgccggcagcggcccggacgcggcgccctatttccgcgtcttcaacccg
atcacccagcgcgagaaattcgaccccgaccgcgcctatgtctcgcgctggatcgccgag
gggcagcgccgcccgcccgagaccgcgctgagctatttcgacgcgatccccgagagctgg
gcgatggcgccgggcgatgcctatcccgagccggtggtcagcgccgaggacgggcgcaag
gcggcgctggcggcctatgaagcgcgcgatttctga
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