Salipiger abyssi: Ga0080574_TMP4210
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Entry
Ga0080574_TMP4210 CDS
T04681
Name
(GenBank) DNA repair protein RadA/Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP4210
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ga0080574_TMP4210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
AAA_22
AAA_30
AAA
KdpD
NTPase_1
SLFN-g3_helicase
nSTAND3
MeaB
AAA_5
AAA_24
DUF7125
CobU
NACHT
HepII_C
CbiA
DZR
MCM
ATPase_2
DAP3
PAXNEB
DUF815
DUF7129
Motif
Other DBs
NCBI-ProteinID:
APZ54544
UniProt:
A0A1P8UYS1
LinkDB
All DBs
Position
complement(3618785..3620149)
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AA seq
454 aa
AA seq
DB search
MARASSNFVCQSCGNSTSKWSGRCEACGEWNTIVEEAPLSDGPAGKTLGQAKGRAAKLTD
LSHPEAPPPRTACGIGELDRVLGGGLVPGSAILVGGDPGIGKSTLLLQAAAAFANAGLKV
IYASGEEASAQVRMRAQRLDLAQAPVKLAAETNLRDILTTLEQEKPALAIVDSIQTMWAD
NVGSAPGSVGQVRAAAHELTSFAKKRNTSVIMVGHVTKDGQIAGPRVVEHMVDTVLYFEG
ERGHQFRILRSVKNRFGPADEIGVFEMTGAGLSEVGNPSALFLSERGTPAPGSVVFSGIE
GTRPVLVEFQALVAPSPHSQPRRTVVGWDGGRLAMILAVLEARCGIPFAGLDVYLNVAGG
MKVGEPAADLAVAAALLSAREDVALPPETVVFGEISLSGALRPVGQTENRLKEAQKLGFS
TAILPKGGKAKSGDMTLTEMADLASVVGEVFGAG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcatcctcgaatttcgtctgtcagtcctgcggcaacagcacttcgaaatgg
tcggggcgctgcgaggcctgcggcgagtggaacaccatcgtcgaagaggcgcccctctcg
gacgggcccgcgggcaagacgctgggccaagccaaaggccgcgccgccaagctcaccgat
ctcagccatcccgaggccccgccgccgcgcaccgcctgcggcatcggcgagctcgaccgg
gtgctgggcggcgggctggtgccgggctccgccatccttgtgggcggcgatcccggcatc
ggcaaatcgacgctgctgttgcaggcggcggcggcctttgccaatgccgggctcaaggtg
atctatgccagcggcgaagaggccagcgcccaggtgcgcatgcgcgcacagcggctggat
ctggcacaggcgcccgtgaaactcgccgccgagaccaatctgcgcgacatcctcaccacg
ctggagcaggaaaagccggcgctcgccatcgtcgattcgatccagaccatgtgggcggac
aatgtgggctctgcccccggctcggtgggacaggtgcgcgccgccgcccatgagctgacg
agctttgcgaaaaaacggaatacatcggtgatcatggtgggccatgtcaccaaggacggc
cagatcgccggcccccgcgtggtcgagcacatggtcgacacggtgctctatttcgaaggc
gagcgcggccatcagttccgcattctgcgctcggtcaagaaccgcttcggccccgccgac
gagatcggcgtcttcgagatgaccggcgcggggctgtcggaggtcggcaacccctcggcg
ctgttcctgtcggagcgcggcacgcccgccccgggctcggtggtgttttccggcatcgag
ggcacgcgcccggtgctggtggaatttcaggcgcttgtcgccccctcgccgcattcgcag
ccgcgccgcacggtggtgggctgggacggcgggcggctggcgatgatcctcgcagtgctg
gaggcgcgctgcggcatcccctttgccgggctcgacgtctacctcaatgtcgccggcggc
atgaaggtcggcgagccggcggcggatctggcggtggcggcggcgctcttgtcggcgcgc
gaggatgtggccttgccgccggaaaccgtggtattcggcgaaatcagcctctccggcgcg
ctgcgcccggtgggccagaccgaaaaccggttgaaagaggcgcaaaaacttggtttctcc
acggccattctcccgaagggtggaaaggccaagagtggcgacatgacgctcaccgaaatg
gccgatctggccagcgtggtgggcgaggtattcggcgccggctga
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