Salipiger abyssi: Ga0080574_TMP4472
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Entry
Ga0080574_TMP4472 CDS
T04681
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paby01002
]
Ga0080574_TMP4472
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paby01011
]
Ga0080574_TMP4472
Peptidases and inhibitors [BR:
paby01002
]
Cysteine peptidases
Family C82
Ga0080574_TMP4472
Peptidoglycan biosynthesis and degradation proteins [BR:
paby01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Ga0080574_TMP4472
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
APZ54806
UniProt:
A0A1P8UZL6
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All DBs
Position
complement(3888293..3889876)
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AA seq
527 aa
AA seq
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MALAAGWMTAAVPGGASAQTLALTAYKQAVAESLSEDEGLAAFYRARGFEPLWTSADAKA
TERRAALIEALSQADLHGLPVQRYDVDGLMTELRTVRGDRARGLAEVALSRAYLQFAHDL
NGGLLDGRRVDSGIKRAPQRLSSQLLLERLASEEPRAVLRGLAPQSPEYARLMREKLMLE
HSIAHGGWGPAIRTGKLEPGQSGAPVVALRDRLVAMGYLAPSLSASYDEPLRAAVTAFQE
DHGLETDGVAGASTLSSINIGPEERLKSVIVAMERERWMNLPDGLGKRHILVNLTDFHAR
IIDDGKVSFETRSVIGHQDPDRRTPEFSDVMEFMVINPSWYVPRSIIVNEYLPLLRRNPG
AVGHLEITDSRGRRVNRGRGFSQYTAASFPFAMRQPPGPRNALGQVKFMFPNKYNIYLHD
TPSKSLFDHTRRTYSHGCVRLGDPKDFAYALLARQTDDPVGFFQARLRTGSESRVNLDDP
VPVHLIYRTAFTQAKGKVNYRDDMYGRDAKLWNALSAAGVALAAPQS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcttgccgctggctggatgacggcggcggtgcccggtggcgcgtctgcgcagaca
ctggcgctgacggcttacaaacaggcggtggcggagtcgctttccgaagacgaggggctc
gcggccttctaccgggcgcggggattcgagccgctctggacctctgccgatgccaaagcg
accgagcgccgcgccgcgctgatcgaggcgctgtcgcaggcggatctgcacgggcttccg
gtacaacgctacgatgtggacgggcttatgacagagctgcgcacggtgcgcggcgaccgc
gcacgcggcctggccgaggtggcgctgagccgcgcttatctgcaattcgcacacgatctg
aacggcggccttctcgatgggcgccgcgtcgattccggcatcaagcgcgcgccgcaaagg
ctgtcttcgcaactgctgctggagcgtctggccagcgaagagccgcgcgcggtgctgcgc
ggactggcgccgcagagcccggaatatgcccggctgatgcgcgaaaagctgatgcttgaa
cacagcattgcccatggtggctggggcccggcgatccgcacgggtaagctcgagccgggg
cagagcggcgcgcctgtcgtggcgctgcgtgaccggctggtggcgatgggctatctggcg
ccgtcgctctcggccagctatgacgagccgctgcgcgcggcggtgacggcctttcaggag
gatcacgggctcgaaaccgacggcgtcgccggtgcctcgaccctgtcgagcatcaatatc
ggccccgaggagcggctgaaatcggtcatcgtggcgatggagcgcgagcgctggatgaac
ctgcctgacgggctggggaaacggcacatcctcgtcaatctcaccgatttccacgcccgc
atcatcgacgacggcaaggtcagcttcgagacccgctcggtgatcggccatcaggatccc
gaccggcgcacgccggagttttccgacgtgatggagttcatggtgatcaacccgtcctgg
tatgtgccgcgctcgatcatcgtgaacgaatacctgccgctgctgcgccgcaaccccggc
gcggtggggcatctggagatcaccgacagccgcggccggcgggtcaatcgcggtcggggc
ttttcgcaatacaccgccgcgagcttcccctttgccatgcgccagccgccggggccgcgt
aatgcgctggggcaggtgaagttcatgttccccaacaagtacaacatctatctgcatgat
acgccgtcgaaaagtctgttcgatcacacgcggcggacctattcgcatggctgtgtccgg
ctcggcgatccgaaggatttcgcctatgcgctgctggcgcggcagaccgacgatccggtt
ggctttttccaggcgcgcctgcgcaccggcagcgaaagccgggtgaatctcgacgatccg
gtgccggtgcatctgatctaccgcaccgcctttacccaggcgaagggcaaggtgaattac
cgcgacgacatgtatgggcgcgacgccaagctctggaatgcgctttctgccgcaggggtg
gcgctggcggctccgcagagttaa
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