Salipiger abyssi: Ga0080574_TMP4796
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Entry
Ga0080574_TMP4796 CDS
T04681
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paby03016
]
Ga0080574_TMP4796
Enzymes [BR:
paby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Ga0080574_TMP4796
Transfer RNA biogenesis [BR:
paby03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ga0080574_TMP4796
Prokaryotic type
Ga0080574_TMP4796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
APZ55130
UniProt:
A0A1P8V0F1
LinkDB
All DBs
Position
complement(4207131..4207898)
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AA seq
255 aa
AA seq
DB search
MPRYALLVEYDGGPFSGWQRQADQPSVQGAIEAALARLEPRDHTIAAAGRTDAGVHARGQ
VAHCDMAKDWDPFRLSEALNYHLKPAPVAIRACAAVDDDWHARFSALERRYLFRLLVRRA
PATLEAGQVWRVMNPLDLGAMRAGAAHLIGLHDFTTFRSTMCQAASPVKTLDEIRIEQVE
TGAGTEFHFSLRARSFLHNQVRSIVGTLERVGAGSWAPGDVKTALEACDRAACGPVCPPQ
GLYLMGVGYPEAVFG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcccagatacgcgcttttggtggaatatgacggcgggcctttttcgggctggcagcgg
caggcggatcagccctcggtgcagggcgcgatcgaggccgcgctggcgcgtctcgagccg
cgcgatcacacgattgccgccgccgggcgcaccgatgcgggcgtgcatgcgcgcggtcag
gtggcccattgcgacatggcgaaggactgggatccgttccggctttccgaggcgctgaac
tatcacctcaagccagcaccggtggcgatccgtgcctgtgccgctgtagatgacgactgg
cacgcgcggttttcggctctggagcggcgctatcttttccgcctgctggtgcgccgcgcc
cctgcgacgctggaggcggggcaggtctggcgggtgatgaatccgctcgatctcggggcg
atgcgggcgggcgcggcgcatctcatcggccttcacgatttcaccaccttccgctcgacc
atgtgccaggcggcctcgccggtgaagacgctggacgagatccggatcgagcaggtcgag
accggggcgggcacggaattccatttctccctgcgcgcccgcagcttcctgcacaaccag
gtgcgcagcatcgtcggcacgctggagcgggtgggcgcggggagctgggcgccgggtgac
gtgaagacggcgctggaggcctgtgaccgcgcggcctgcgggccggtctgcccgccgcag
gggctctatctgatgggggtggggtacccggaggcggtgttcggctga
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