Salipiger abyssi: Ga0080574_TMP4948
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Entry
Ga0080574_TMP4948 CDS
T04681
Name
(GenBank) TRAP transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
paby
Salipiger abyssi
Pathway
paby02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ga0080574_TMP4948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paby02000
]
Ga0080574_TMP4948
Transporters [BR:
paby02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ga0080574_TMP4948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
APZ55230
UniProt:
A0A1P8V0Q3
LinkDB
All DBs
Position
pPABY4:9507..10790
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AA seq
427 aa
AA seq
DB search
MAVAIGFLLLAVLLVIGLPVALALALSGAVGLYFVGGTALSTGILAAAPLGAVESYEFVM
IPMFILMANFIVVSGVADDMFNIAKTWMGRVPGGLAHATAITGAAFGAISGSSTAAAATL
SSTTIPGMIKHGYDRRLASGVVAISGTLSMLIPPSGAMIIYALLADMSVAKLLIAGIIPG
LMVTAAIMLTILFLVWRNPDHAPSAESYTWRQKFGSLKSAWSFILLFTLVTVVIYTGIGT
PTEASAVGALAALLLAVSRGTTVKELIHAALATAEASCMIALIFLGAQIFVYFLTMTQAT
QDLVTYVMGSGIPPLAILILALAMYLILGCFMDLVAMLILTVPVITPLILQLGYDPIWFA
VITIVMGEVGVLTPPLGMNVFVISKYTKMPVADVFRGSFPHVIAHLILVAILVAFPGLVT
WLPSTMQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgcgatcggtttccttctgctcgccgtcctgctggtgatcgggcttcccgtg
gcgctggcactggcgctctccggcgccgtcgggctctatttcgtcggcggcaccgcgctc
tccacgggcatcctggccgcggcccccctcggcgccgtcgagagctatgagttcgtgatg
atcccgatgttcatcctgatggcgaatttcatcgtggtgagcggcgtcgcggacgacatg
ttcaacatcgccaagacctggatgggccgggtgcccggcgggctggcgcatgccaccgcg
atcaccggcgccgccttcggcgcgatctcgggctccagcaccgccgccgccgcgacgctc
tcctcaaccacgattccgggtatgatcaagcacggctacgaccgccggctcgcctcgggg
gtggtggcgatctcgggcacgctgtcgatgctgatcccgcccagcggcgcgatgatcatc
tatgcgctgctcgccgatatgagcgttgccaagctgctgatcgcggggatcattccgggc
ctgatggtgacggcggcaatcatgctgacgatcctcttcctggtctggcgcaaccccgat
cacgcgccgagcgccgagagctacacctggcggcagaaattcggctcgctgaaatcggcc
tggtccttcatcctgctgttcacgctggtcacggtggtgatctataccggcatcggcacc
cccaccgaggcctccgccgtgggcgctcttgcggcgctgctgctggcggtgagccggggc
accacggtgaaggagctgatccacgcggccctcgccaccgcagaggccagctgcatgatc
gcgctgatctttctgggggcgcagatcttcgtctacttcctgacgatgacccaggcgacg
caggatctggtgacctatgtgatgggctcgggcatcccgccgctggcgatcctgatcctg
gcgctggcgatgtatctcatcctcggctgcttcatggatctggtggcgatgctgatcctg
acggtgccggtgatcacgccgctgatcctgcagctcggctacgatccgatctggttcgcg
gtgatcaccatcgtcatgggcgaggtcggtgtgctgacaccgccactggggatgaatgtc
ttcgtgatctcgaaatacaccaagatgccggtggccgacgtgttccggggctccttcccg
catgtcatcgcccacctgatcctcgtggcgatcctcgtggccttccccggtctggtgacc
tggctgccctcgacgatgcagtga
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