Salipiger abyssi: Ga0080574_TMP4971
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Entry
Ga0080574_TMP4971 CDS
T04681
Name
(GenBank) transcriptional regulator, IclR family
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paby03000
]
Ga0080574_TMP4971
Transcription factors [BR:
paby03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Ga0080574_TMP4971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
MarR_2
HTH_27
MarR
Autoind_bind
Rrf2
HTH_36
DUF4423
DUF7342
RskA_N
HTH_29
Motif
Other DBs
NCBI-ProteinID:
APZ55253
UniProt:
A0A1P8V0S6
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All DBs
Position
pPABY4:32974..33729
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AA seq
251 aa
AA seq
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MERALAVLRSVSLRKLATIAMIHEDTGIDKATIVRLLETLITEGYVHRTEDGPSYEVTRK
VTQLTNGYDRHRELGRVGGLVMEKYRKTITWPMTFAAFDGDAMVIVEAIRKPRGLIVNRV
PGYRFPMLTTSSGLAYLSAVTDAERDTILDHLASQPSPSIWDRRAQDRDEVLRVLETVRQ
QGYAISDRAYYKEQHDGVLWGASVPIRGREETYGAFGIMLLTHVLQRGEGLDEYLPVMQE
IAAEVAETMDN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgcgcgcttgcggtgctgcgctcggtcagcctgcgcaagctggcgacaatcgcg
atgatccacgaggataccgggatcgacaaggccaccatcgtccggctgctcgagacgctg
atcaccgagggctatgtccaccgcaccgaggacggcccgagctacgaggtcacccgcaag
gtgacccagctcaccaacggctatgaccgccatcgcgagctgggccgcgtcggcgggctg
gtgatggagaaataccgcaagacgatcacctggccgatgaccttcgccgccttcgacggc
gacgccatggtgatcgtcgaggcgatccgcaagccgcgcgggctgatcgtcaaccgggtg
ccgggctaccgcttcccgatgctgaccacctcgtccgggctcgcctatctctccgccgtc
accgatgccgagcgcgacaccatcctcgaccatctcgccagccagccctcgcccagcatc
tgggacaggcgcgcgcaggaccgcgacgaggtgctgcgggtgctggagacggtgcgccag
cagggctatgccatcagcgaccgggcctactacaaagagcagcatgacggcgtgctctgg
ggcgccagcgtgccgatccggggccgcgaggagacctatggcgccttcgggatcatgctg
ctgacccacgtcctccagcgcggcgaggggctcgacgagtacctccccgtcatgcaggag
atcgccgccgaagtcgccgagaccatggacaactga
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