Salipiger abyssi: Ga0080574_TMP4989
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Entry
Ga0080574_TMP4989 CDS
T04681
Name
(GenBank) Concanavalin A-like lectin/glucanases superfamily protein
KO
K20276
large repetitive protein
Organism
paby
Salipiger abyssi
Pathway
paby02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ga0080574_TMP4989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Mu_Gam-Sipho_Gp157-TOTE
Motif
Other DBs
NCBI-ProteinID:
APZ55271
UniProt:
A0A1P8V0W2
LinkDB
All DBs
Position
pPABY4:complement(50944..58041)
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AA seq
2365 aa
AA seq
DB search
MLQFDQLVSLNFQGLVVVFGRVAGSDSPDIYFNVLGPGTDPDSAALDWTGFTKLSFPDQV
RQVGMGLITVLADAETMQPSTAPFRVVTDQKYISIVQQSARGTLYVNRFRLLKTGSGSNQ
KTVSYTLNPAWEVRFVRSHKQDVPLDKSDTQEYLDADGKPFLEPALELSMVDAVADGNFD
VALLPVAGSETLAWQFWTLAPDGTTINLFNFPPSSDGLFDITGKTLGENYGIAPDSSFTV
LPEKEADPLALAGPPRAALFVKHEKVVQSDGSSIGVKRASRVMLTLPVTLDDETETVTID
SAIGNAGTMAQLDGAILADAIVPAEFDLVFTTGSYLDLTPGEGDNPLAIAGPYEMHFMAA
PRMLSDGLTILGGDPAADPKTAAPYVKVVDGGKLEIGFGDGTNAVSCRSLHQVLFPQTWS
EITVAYGGAGATPFTLTVNDNPVPLTACTAEAEPTGAPVTTIGGASAGYEGALNRIRIAV
GGTDVLDLPSNAVDYSTTPPTTPNMISNGLTAAVYGPKPEPSTAPVSINTNGAFYVDAAG
LSYYVGLADFIAPKDPACLIDGSDGLLHLYYRGKDDLLSVSQYSTRSARATFYADWSTDW
SEDAPLALTREKVALYRNIPSEDWSHVSATVLAAPDNSQTGFVNFVAHRVGTYMNDSAIE
VTASAISPLLCDVTVTGPEGVGEEIWTGLPRSIEPFSRIWNGAGAGNPDDQAVLNQSRPF
FDYTGTTLSVLAATSAQDGYFLFTSVPGMALTLGSAAVEEGSTSDLATLAFTSSIPPKWT
DGATLTHRWPDMPATARGVTDVLSGRSDSYDYATVETPGTRAYGLPVALTRSDDAMAHVV
IFVRDALGDFSATVSSGPASDRCDVEIAGYALPDVPRDQTGFARVLNGDDTEYGYPEGYT
EEIVPQIYALTNGLTASVLNATAAQTSPLAYAGLLRALYQGPHYDASTIAPMAKSPARVL
QKAELVTDSGRTSVTGSRLFGAVIADPPTNGGLGRLSDTASYTNGKAPVLMPGINGGWMR
VVPQFSLQNEARSASYVGFDIDKSYPPALQLAIDSDLTVESWLKPDASARGETSRLLTYN
ETGTLNHPDLPVQYMMGTQQGPGLIVDDNTYLGASFNFTGPDLTLQTYVKPSSDTASGQI
FMVSAVRGGATFLTLSVTPIGKAELSFRGGTATVTSTGTLPAQTWSCITLSVTDIGAGKV
SLKLYVDDGAPVTVEAENDFSDPLGALTVGSNTGGSMQATLNGVAFWQRALSDTEVRESV
LYGFPDNDPQLGIRWNLAEGAGTQIMNAAASGPDYDTKVINPASPAWDAAGAFDVPYAGR
NDYVLVSNRIVKDWTHVALSSKQGWGLALDGASSGTVADGDAFNPGPSFALEAWVLPDTV
NNKQIILEKPGSYSLAVTTLGQVSLTVNLTQESSDYRLPPTHFDHSVSTAIAAGKASYVA
VNFTSGTVPNDSGSNEFVAQKYFVKASIYVDGQLAAENNVEDLDQPVSISNEDSAFYLGI
GGARTFEFIGKISHVRVWGRTLNSAEIARVNAFHTLPASRDGLTASWDFDEQSGTVARDA
VGDNDMVLSSNQLWTLWQDVASAEIWVDGGASLPQRKTATDLGGYGDSQMTIGGALAEGS
LTLPFTGQFDDIRLFSIRLTGTQIGESNNTPLGGQEDGLNAYWMVDAGSGGVLYDMTGKG
NNGSLLPKAKPPVWSAGAAPIQNEAEYVVNALGGAVDYHSAQIAGQPSVVEYASLQKDAY
GAVYSVMMRGYFYFTDVGNTELQTGYKVGDLDTVFVGQVQSKPSIVGYIEGGPPLPSENQ
TLAYWSGDMGGPARLYSTTSTVAYIESETKTWSFSASQGSTFKGEFNIKGGLYQVTKTGT
SVGVGAEAETEALENKLKIGAKLKIGGDIGHTDGVSQSHSQTQALTASLTPSGTWEPEDN
ILNPTVGRRYIQNNLGAAIVKSATADLYMMALKGTQTPVGYQLIPNETIPVDTNIIDFPI
NPKYVKNGTLDGKVGLVNDPDYPNANAERGSYFKPVEAYALKRRIEKQEQQLAAYYDQFS
TDKYRVIGSLGRVKDELGENPAFNFGDQTNQRSLCNNYVWSAGGGLRKEEQSVANSYSET
YTGASSLTVAGGIEASADIGTPFGGYYIEADVLLGNTWSMTATKSASASNAFSLACTVSP
TEFLSAPIMETDETGALLFKGYEKTPAPGKVDAYRYMAFLLAPAAENFTALNQVVDPNWL
NNATTAAASAMREALSDATQPWRLLYRTTYVSRVPAPFQPVRDDTTSPTITPPANVPSNY
WLMAIVNRFVPTPSPTPLEIGTAIDQVLGSRATPGVLKDLIPWWESFYAKAQEYGSEEFI
ELAELRVDLLDYMLSAYEAAAYAES
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattcgaccaactcgtttcgctcaactttcagggcctcgtcgtcgtctttggc
cgggtcgcgggcagcgacagcccggatatctacttcaacgtgctcggccccgggacggac
ccggacagcgccgcgctcgactggaccggcttcaccaaactgagcttccccgatcaggtg
cgccaagtgggcatggggctgatcaccgtgctggccgatgccgagaccatgcaaccctcg
accgcgcccttccgcgtggtgaccgatcagaaatacatctccatcgtgcagcaatcggcg
cgcggcacactctatgtgaaccgcttccgcctgctcaagaccggcagcggctcgaaccag
aagacggtgagctacacgctcaacccggcctgggaggtgcgctttgtgcgcagccacaag
caggacgtgccgctcgataaatccgacacgcaggaatatctcgacgccgacggcaagccg
ttcctggaaccggcgctggaactgtccatggtcgatgcggtggccgatggcaatttcgac
gtggcgctgctgccggtcgccggctcggaaaccctggcctggcagttctggacgctggcg
cccgacggcacgaccatcaacctcttcaatttcccgcccagcagcgacgggcttttcgac
atcaccggcaagacgctcggcgagaattacggcatcgcgccggattccagcttcacggtg
ctgccggaaaaggaggccgacccgctcgccctcgccgggccgccccgtgccgcgctcttc
gtcaagcacgaaaaggtggtgcagtcggacggctccagcatcggggtgaaacgcgcctcg
cgggtgatgctgaccctgccggtgaccctcgacgacgagaccgagaccgtcaccatcgac
agcgctatcggcaatgccggcaccatggcccagctcgacggcgcgatcctcgccgacgcg
atcgtgcccgccgagttcgatctggtcttcaccaccggctcttatctggatctgacgccg
ggcgagggcgacaaccccttggccatcgccggcccctacgagatgcatttcatggccgcg
ccccgcatgctgagcgacgggctcaccatccttggcggcgatccggcggccgatcccaaa
accgccgcgccctacgtgaaagtggtcgatggcggcaagctcgagatcggctttggcgac
ggcacaaacgcggtgagctgccgcagcctgcatcaggtgctgtttccgcagacctggtcc
gagatcaccgtggcctatggcggcgctggcgccacccccttcaccctgacggtcaacgac
aacccggtgccgctgaccgcctgcaccgccgaggccgagcccaccggcgcgcccgtcacc
accatcggcggcgccagcgccggctatgagggcgcgctcaatcgcatccgcatcgcggtg
ggtggcaccgatgtgctcgacctgcccagcaacgcggtggattacagcaccaccccgccg
accacccccaacatgatctccaacgggctgaccgccgcagtctacgggcccaagcccgaa
ccctccaccgcgccggtcagcatcaacaccaatggtgccttctatgtcgatgcggcgggg
ctcagctactatgtcgggctcgccgatttcatcgcccccaaggatcccgcctgcctgatc
gacggctccgacgggctgctgcatctctattaccgcggcaaggacgacctactctcggtg
tcgcaatattccacccgctccgcccgcgcgaccttttacgccgactggtcgaccgactgg
tccgaggacgcgccgctggcactcacccgcgaaaaggtcgcgctctaccgcaatattccc
agcgaggactggagccatgtctccgccacggtgcttgccgcgcccgacaattcgcagacc
ggctttgtgaacttcgtcgcccatcgcgtcggcacctatatgaacgacagcgccatcgag
gtgacggcctcggcaatctcaccgctgctctgcgacgtgacggtgaccggccccgagggc
gtcggcgaggagatctggaccggcctgccccgctccatcgagcccttctcgcggatctgg
aacggcgccggcgccggcaaccccgacgatcaggcggtgctgaaccagtcgcggcccttc
ttcgactataccggcaccacgctttcggtgctcgccgcaacaagcgcgcaggacggctat
ttcctcttcacctcggtgcccggcatggcgctcacccttggctcggcggcggtcgaggag
ggcagcacatccgatctggcaacgctcgccttcacctcgtcgatcccgccgaaatggacc
gatggcgccacgctcacccatcgctggccagacatgccagccaccgcgcgcggcgtgacc
gatgtgctctcgggccgctctgacagctacgattatgcgacggtggagacccccggcacc
cgcgcctatggcctgccggtggcgctcacccgttccgacgacgccatggcgcatgtggtg
atctttgtccgcgacgcgctcggggatttctccgccacggtgagttccggtccggcaagc
gaccgctgcgatgtcgagatcgcgggctacgccctgcccgatgtaccgcgcgaccagaca
gggttcgcccgcgtgctgaacggcgacgacacggaatacggctatccggaggggtacacc
gaagagatcgtcccgcagatctatgcgctcaccaacgggctcaccgcttcggtactgaac
gcgaccgccgcgcagacctcgccgctcgcctatgccgggctgctgcgcgcgctctatcag
gggccgcattacgatgcttcgaccatcgctccgatggcaaagagcccggcgcgcgtgctc
cagaaggcggagcttgtcaccgatagcggcaggaccagcgtcaccggctcgcggctcttt
ggcgcggtgatcgccgatccgccgaccaatggcgggctcgggcggctctcggacaccgcc
agctacaccaatggcaaggccccggtgctgatgcccggcatcaacggcggctggatgcgc
gtcgtgccgcagttcagcctgcaaaacgaggccagatccgccagctatgtcggctttgac
atcgacaagagctatcccccggcgctgcaactggccatcgacagcgacctgaccgtcgag
agctggctgaagcccgacgcctccgcgcgcggcgagacctcgcggctgctcacgtataac
gagaccggcacgctgaaccatcccgacctgccggtgcaatacatgatgggcacgcagcag
gggccggggctgatcgtcgatgacaacacatatcttggcgcctcgttcaacttcaccggc
ccggacctgacgctgcaaacctatgtcaaaccgtccagcgacaccgccagcggtcagatc
ttcatggtctcggcggtgcgcggcggcgccaccttcctcaccctgtcggtcaccccgatc
ggcaaggccgagctgagcttccgcggcggcacggccaccgtcacctccaccggtaccctg
cccgcgcagacatggagctgcatcaccctctcggtgaccgatatcggcgccggcaaggtg
tcgctgaaactctatgtcgacgacggcgcgccggtcaccgtcgaggccgagaacgacttt
tccgatccgctgggcgcgctcaccgtagggtcgaacaccggcggcagcatgcaggccacg
ctgaacggcgtcgccttctggcagcgcgcgctctccgacacggaggtgcgggaaagcgtg
ctctacggtttccccgacaacgacccgcagctcggcatccgctggaatctcgccgaaggc
gcgggcacccagatcatgaacgccgccgcctccggcccggattacgacaccaaggtcatc
aaccccgcaagccccgcctgggacgcggcgggcgctttcgacgtgccctatgccgggcgc
aacgattacgtgctggtctccaaccgcatcgtcaaggactggacccatgtggcgctcagt
tcgaaacagggctgggggctggcgctcgacggcgccagttccggcacggtcgcagatggc
gacgccttcaaccccggcccctccttcgcgctcgaagcctgggtcttgcccgacacggtc
aacaacaagcagatcatcctggagaaacccggcagctactcgctcgccgtgaccacgctg
gggcaggtctcgctgaccgtgaacctgacgcaggaaagcagcgactaccggttgcccccc
acccatttcgaccactccgtgagcacggccatcgccgccggcaaggcctcgtatgtcgcg
gtgaacttcaccagcggcacggtgcccaacgacagcggcagcaacgagttcgtcgcgcag
aaatacttcgtcaaggcgtcgatctatgtcgacggccagctcgcggcggaaaacaatgtc
gaggatctcgaccagccggtctcgatctcgaacgaggacagcgccttttatctcggcatc
ggcggcgcccggacgttcgaattcatcggcaagatctcgcatgtgcgggtctggggccgg
acgctcaacagcgccgagatcgcccgggtcaacgccttccacaccctgcccgccagccgc
gacgggctcaccgcaagctgggatttcgacgagcagagcggcaccgtcgccagggatgcc
gtcggcgacaacgacatggtgctgagctccaaccagctctggacgctctggcaggacgtg
gccagcgccgagatctgggtcgatggcggcgccagcctgccgcagcgcaagaccgccacc
gatctgggcggctatggcgacagccagatgaccatcggcggcgcgctggccgagggcagc
ctcaccctgcccttcaccgggcagttcgacgacatccgcctgttctccatccggctcacc
ggcacccagatcggcgagagcaacaacaccccgctcggcgggcaggaagacgggctcaac
gcctactggatggtcgatgccggctcgggcggcgtgctctacgacatgaccggcaagggc
aataacggcagcctgctgcccaaggccaagccgccggtctggtccgccggcgccgcgccg
atccagaacgaggcggaatatgtggtcaacgcgcttggcggcgcggtggattaccacagc
gcgcagatcgccgggcagccctcggtggtggaatacgccagcctccagaaagacgcctat
ggcgcggtctactcggtgatgatgcggggctatttctacttcaccgacgtcggcaatacc
gagcttcagaccggctacaaggtcggcgatctcgacacggtctttgtcggccaggtgcag
agcaagcccagcatcgtcggctatatcgagggcggcccgccgctgcccagcgagaaccag
acgctggcctactggtccggcgacatgggcggcccggcgcggctctactccaccaccagc
accgttgcctatatcgaaagcgagaccaagacctggtccttcagcgccagccagggctcg
accttcaagggcgagttcaacatcaagggcgggctctatcaggtcaccaagaccggcacc
tcggtcggcgtcggcgccgaggccgagaccgaagccctggagaacaagctcaagatcggc
gccaagctcaagatcggcggcgatatcggccataccgacggcgtcagccagagccattcg
cagacccaggcgctgaccgcctcgctgacgccctcgggcacctgggagccggaggacaat
atcctcaaccccacggtcgggcgccgctacatccagaacaacctcggcgcggcgatcgtg
aaatcggccacggcggatctctacatgatggcgctcaagggcacgcagacgccggtgggc
tatcagctcatcccgaacgagacgatcccggtcgataccaatatcatcgacttcccgatc
aacccgaaatacgtcaagaacggcacgctcgacggcaaggtcgggctggtcaacgacccc
gattatcccaacgccaatgccgagcgcggcagctatttcaagccggtcgaagcctatgcg
ctgaaacgccggatcgaaaagcaggagcagcagctcgccgcctattacgatcagttcagc
accgacaaataccgcgtcatcggctcgctggggcgggtcaaggacgagctgggcgaaaac
cccgccttcaatttcggcgatcagaccaaccagcggagcctgtgcaacaattacgtctgg
tccgccggcggcgggctgcgcaaggaagagcagtcggtcgccaacagctattccgagacc
tataccggcgccagctcgctgaccgtcgccggcgggatcgaggcctccgccgatatcggc
acgcctttcggcggctactatatcgaagccgacgttctgctcggcaacacctggtcgatg
accgcgaccaaatccgccagcgcgtccaacgccttcagcctcgcctgcaccgtgtcgccg
accgagttcctctcggccccgatcatggagacggacgagaccggcgcattgctcttcaag
ggctacgaaaagacgcccgcgcccggcaaggtcgacgcttatcgctacatggccttcctg
ctggcgccggcggcggagaacttcaccgcgctgaaccaggtggtcgatcccaactggctc
aacaacgccaccacggcggcggccagcgccatgcgcgaggcgctcagcgatgcgacgcag
ccctggcggctcctataccgcaccacctatgtgagccgcgttcccgcgccgttccagccg
gtcagggacgacaccaccagcccgacgatcacgccgcccgcgaacgtgccgtcgaattac
tggctgatggccatcgtcaaccggttcgttccgaccccctcccccaccccgctcgagatc
ggcaccgccatcgaccaggtgctgggcagccgcgccacccccggcgtgctcaaggatctc
atcccttggtgggagagcttctacgccaaggcgcaggaatacggatcggaggaattcatc
gagttggccgagcttcgggtcgacctgctcgactacatgctctcggcctatgaggcggcg
gcctacgccgaaagttaa
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