Salipiger abyssi: Ga0080574_TMP5070
Help
Entry
Ga0080574_TMP5070 CDS
T04681
Name
(GenBank) type IV secretion system protein VirD4
Organism
paby
Salipiger abyssi
Pathway
paby03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Ga0080574_TMP5070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
VIT1
DUF2157
Motif
Other DBs
NCBI-ProteinID:
APZ55352
UniProt:
A0A1P8V123
LinkDB
All DBs
Position
pPABY8:4384..6237
Genome browser
AA seq
617 aa
AA seq
DB search
MKETAAQGEETFKRFRADPVSEAQKTAAAARKATRKASKATGQERPLLARAIGPAALFII
GAVIIFSAQSNSVLGPAAEAQLGSAFAAVLAAFMVGFLPVLAFTRFTLWALAGLALVLFG
LITTPGLGATLIAPLAVVGFVGGIMAGVHFFVRAPDSSTDAYGSARLARRADIEAAGLLD
GKGYRVGTFEDNEGESLLRYAGQRHLLTCAPTRAGKGVSAIIPNLLTYDGSMLVIDPKGE
NLMITAEQRHRLGHDVQALDPWNIGASFFEGGTPSRFNPLDFLDAASPDLIENAMILADA
LVVVGDGDAKFWDEEAKALLMGLLLYVATAPEEAEHRHLPRVRDLLLGDDEDMDELFERM
MASDNAAVRGAGARALQKEPKMRSSVLATAQSHTHFLDSPRIRENMAASDFRFGDMKREK
LSIYVILPADRLSTFDRWLRLIISIAIIENARNIDVEPEQPVLFLLDEMAALGRLKPVET
AFGLMAGFGMQLWGIVQDLSQLERIYGKGWETFVGNSGVLQYFGSRDKMTAEYFSALCGT
KTAKTISGQVRQALTGMAEEPGSYGETGRPLFMPDELMVMKSDRQLLLVETNYPIVGTRV
PWFNDPDLKTLGRNLKG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaccgccgcgcaaggggaagagaccttcaagcgcttccgcgccgatcccgtg
agcgaagcgcagaagacagcggcagcggcacggaaagccacccgcaaagcgagcaaggcg
acggggcaggagcgcccgctcctggcgcgggcgattggcccggccgccctgttcatcatc
ggagcggtgatcatcttttccgcgcagagcaacagcgtattaggaccggcggctgaggcg
cagctcggaagtgcgttcgccgctgtgctggccgcgttcatggtgggcttcttgcccgtc
cttgccttcacccgttttacgctctgggcacttgcggggctcgctctggtgctcttcggc
ctgatcacgacgcccggcctcggcgcgaccttgatcgcgccgctggccgttgtcggcttt
gtgggcgggattatggccggtgtgcatttcttcgtgcgcgcgcccgatagctcaaccgat
gcctatggttcggcccggcttgcccgccgcgccgatatcgaggccgcagggctgctcgat
ggcaagggctaccgtgtcggcacctttgaggacaacgagggggaaagcctgctgcgctat
gcagggcagcgccaccttctcacctgcgcgcccacgcgggcgggcaagggggtgagcgcg
atcatcccgaacctgctcacctatgacggctcgatgctggtgatcgaccccaaaggtgaa
aacctcatgatcacggcggagcagcgccaccgcctcggccatgacgtgcaggcgctcgat
ccgtggaatatcggggcgagcttcttcgagggcggcacgccctcgcgcttcaacccgctc
gactttctcgatgcggccagccccgatctgatcgagaacgccatgatcctcgccgacgcg
cttgtggtcgtcggcgacggggatgcgaagttctgggacgaggaggccaaggcgctgctt
atggggcttctgctctatgtggcgaccgcgcctgaagaggccgaacatcggcatttgccg
cgcgtccgcgatctcctccttggcgatgacgaagacatggatgaactcttcgagcgcatg
atggcctctgacaatgctgccgtgcgcggggcaggggcgcgggcgcttcagaaggagccg
aagatgcgctcaagcgtgctggcgacggcgcagtcgcacacgcatttcctggacagcccg
cgcatccgtgaaaacatggcagcctcggatttccgcttcggcgacatgaagcgggaaaag
ctctcgatctatgtcatcctgcctgcggacaggctctcgaccttcgaccgctggctgcgc
ctgatcatctcgattgcgatcatcgagaatgcccgcaacatcgacgtggaacccgaacag
cccgtgctgtttctgctcgatgagatggccgcgctcggacggctgaagccggtcgagacc
gccttcggcctgatggcgggcttcgggatgcagctctgggggatcgtgcaagacctctct
cagctcgaacgcatctacggcaagggctgggaaaccttcgtcggcaattcgggcgtgctg
caatacttcggcagccgcgacaagatgacggcggaatacttctcggcgctctgcggcacc
aagacggcaaagacgatctcgggccaggttaggcaagcgctcacgggcatggccgaagag
ccgggtagctatggcgagacaggacggccgctcttcatgcccgatgaactcatggtcatg
aaatccgaccgtcagctcctcctggtcgagacgaactatcccatcgtcggcacgcgcgtg
ccgtggttcaacgaccccgatctgaagacgctcgggcgcaatctgaaaggttag
DBGET
integrated database retrieval system
