Salipiger abyssi: Ga0080574_TMP844
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Entry
Ga0080574_TMP844 CDS
T04681
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
paby
Salipiger abyssi
Pathway
paby00020
Citrate cycle (TCA cycle)
paby00630
Glyoxylate and dicarboxylate metabolism
paby01100
Metabolic pathways
paby01110
Biosynthesis of secondary metabolites
paby01120
Microbial metabolism in diverse environments
paby01200
Carbon metabolism
paby01210
2-Oxocarboxylic acid metabolism
paby01230
Biosynthesis of amino acids
Module
paby_M00009
Citrate cycle (TCA cycle, Krebs cycle)
paby_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ga0080574_TMP844
00630 Glyoxylate and dicarboxylate metabolism
Ga0080574_TMP844
Enzymes [BR:
paby01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
Ga0080574_TMP844
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
HTH_22
HTH_31
Sigma70_r4_2
HTH_8
Xre-like-HTH
AbiEi_4
HTH_3
HTH_23
HTH_29
HTH_psq
HTH_11
Motif
Other DBs
NCBI-ProteinID:
APZ51178
UniProt:
A0A1P8UPA0
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All DBs
Position
complement(174817..176016)
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AA seq
399 aa
AA seq
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MPDADTYLSAEQAAETLGISRATLYSYVSRGLIRAVNVEGDPRRRLYDLHDIEQMRRRKS
VGRRPRDVAATTLDWGFPVLSSGISQIERGRLGFRGQDAVDWAGHATLEDTARLLWSCGD
SDPFAGAAAPEAGWDGGLLERAAGLPLTERCQALLPFVAAGRATAWQRASPRLWHGAVAL
LRATAAAASGTAPGARPVHEHLSSAWGLDPAAEQVVRRALVLLADHELNASAFAVRVVAS
TGASLGACLTAGLSALSGPLHGGTISLVERLLEDCHGDAEAEVETRLRRGEGVPGFGHPL
YPDGDPRAAALLPLLPPDPERDALVSVMAETVGKLPNVDFALAAIRLAFDLPKDSGHVVF
AVGRTVGWIAHALEQYGEGKLIRPRAQYTGPAPGRDAEM
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcagatacctatctcagcgcggaacaggccgccgagaccctcggcatcagc
cgcgcaacgctctattcctatgtcagccgggggttgatccgcgccgtgaacgtggaggga
gatccacgccgccgcctctacgatctgcatgacatcgaacagatgcggcggcgcaagagt
gtcgggcggcgcccgcgcgacgtggcggcgacgacgctcgactggggctttcccgtgctg
tcctccggcatctcacagatcgagcgcggacgtctcggctttcgcggtcaggatgccgtg
gactgggccgggcacgcgacgctggaagacaccgcgcgcctgctctggtcctgtggcgac
agcgacccctttgccggggcggcggcaccggaggccggttgggatggcgggcttctggag
cgggcggcggggctgccgctgacggagcggtgtcaggcgttgctgcccttcgtcgcggcg
ggccgggcgaccgcgtggcaacgcgccagcccgcggctctggcacggtgcggtggcgctg
ttgcgagccaccgccgctgccgccagcggcacggcgccgggggctcggcccgtccacgaa
catctctcgtcggcctgggggctcgatcctgcggcggagcaagtcgtccgccgggcgctg
gtgctgctggccgatcacgaactgaacgcctcggccttcgcggtgcgcgtggtcgcctcg
accggcgcgtcgcttggggcctgcctgaccgcagggctctcggcgctcagcgggccgttg
cacggcggaacgatcagccttgtcgagcggctgcttgaggattgtcacggcgatgccgaa
gcggaggtcgagacgcggctgcggcggggggagggggtgcccggcttcggccatccgctc
tatcccgatggagatccgagggcggcggcgctgttgccgctgctgccgcccgatcccgag
agggatgcgcttgtctcggtcatggcggagacggtcggcaagttgccgaatgtcgatttc
gcgctggccgcgatccgcctcgcgttcgacctgccgaaggacagcgggcatgtcgtcttt
gcggtgggccgcacggtcggctggatcgcccatgcgctggagcaatatggcgagggcaag
ctgatccgccctcgggcgcagtataccggccctgcgcctggccgtgatgcggagatgtga
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