Salipiger abyssi: Ga0080574_TMP962
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Entry
Ga0080574_TMP962 CDS
T04681
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paby03021
]
Ga0080574_TMP962
Transcription machinery [BR:
paby03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ga0080574_TMP962
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
UCR_14kD
Sigma70_r3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
APZ51296
UniProt:
A0A1P8UPG3
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All DBs
Position
complement(285357..286253)
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AA seq
298 aa
AA seq
DB search
MSNYANLPAPSPEAGLSRYLSEIRKFPLLEPEEEYMLAKRWVEDQDAPSAHKLVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKSRIGALEEGDLRPEHVEKIATDLGVTEDEVISMNRRL
SGGDASLNATVGSDDDGSMQWQDWLEDEDADQAADYAERNELEARRTMLAQAMDVLNERE
RDILTQRRLAEQPVTLEELSGVYDVSRERIRQIEVRAFEKLQKRMRDLAQDQGMMAEA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaattatgccaatctcccggcaccatcgcccgaagcgggcctgagccggtacctg
tccgagatccggaagtttccgcttctggaaccggaagaagaatacatgctggccaagcgc
tgggtcgaggatcaggatgcgccgtccgcgcataagctggtcaccagccacctgcgcctc
gcggccaagatcgccatgggctatcgcggctatgggttgccgcaggctgaggtgatctcc
gaggccaatgtcggcctgatgcaggcggtcaaacgcttcgacccggaaaagggctttcgc
ctggcgacctatgcgatgtggtggatccgcgcgtcgattcaggaatatatcctgcggtcg
tggtcgctggtgaagctcggcaccacctcggcgcagaagaagctgttcttcaacctgcgc
aaggccaagtcgcgcatcggcgcgctggaagagggcgatctgcgccccgagcatgtcgaa
aagattgccaccgatctcggtgtgaccgaggacgaggtgatctcgatgaaccggcgcctg
tcgggtggcgacgcctcgctgaacgcgaccgtgggcagcgacgacgacggctcgatgcag
tggcaggactggctggaggacgaagacgccgaccaggccgccgattacgccgagcgcaac
gagcttgaggcgcggcgaaccatgctggctcaggcgatggatgtgctgaacgagcgcgag
cgcgacattctcacccagcgccgtctggccgaacagccggtgacgctggaggagctctcg
ggcgtctacgatgtcagccgcgagcggatccggcagatcgaggtgcgcgcctttgaaaag
ctgcaaaagcgcatgcgcgatctggcgcaggatcaggggatgatggcggaggcctga
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