Salipiger abyssi: Ga0080574_TMP998
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Entry
Ga0080574_TMP998 CDS
T04681
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
paby
Salipiger abyssi
Pathway
paby00450
Selenocompound metabolism
paby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Ga0080574_TMP998
Enzymes [BR:
paby01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Ga0080574_TMP998
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Ga0080574_TMP998
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
APZ51332
UniProt:
A0A1P8UPK7
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All DBs
Position
complement(317213..318433)
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AA seq
406 aa
AA seq
DB search
MYDVSEIRRDFPILSREVNGKPLVYLDNGASAQKPQVVIDAVTRGYAEEYANVHRGLHFL
SNLATEKYEAVRGTVARFLGARDEEEVVFTSGTTEGINLVAYSWAMPRLEPGDEIILSVM
EHHANVVPWHFLRERQGVVIKWVDVDATGALDPQQVIDAIGPKTKLIAITHLSNVLGTVV
DVKTICAAARQRGVAVLIDGSQSAVHMPVNVEEIGCDFYAITGHKLYGPSGSGAIWIRKE
RMDEMRPFMGGGDMIREVHKDSVTYADPPMKFEAGTPGIVQQIGLGVALDYLMDLGMENI
AAHEASVAAYAKARMEGLNWLQVQGHAPGKAAIFSFTLEGAAHAHDISTILDKKGVAVRA
GHHCAGPLMDHLGVSATCRASFGLYNTEQEVDALIDALELAHELFA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatgtatccgaaatccgccgcgattttccgatcctctcacgcgaggtgaacggc
aagccgctggtctatctcgacaacggcgcctcggcgcagaaaccgcaggtcgtgatcgac
gcggtgacgcgcggctatgccgaggaatatgccaacgtgcatcgggggctgcatttcctc
tccaacctcgcaaccgagaaatacgaggcggtgcgcggcaccgtggcgcgctttctcggt
gccagggacgaggaggaggtggtctttacctccggcaccaccgaggggatcaacctcgtg
gcctatagctgggcgatgccccggctcgagccgggagacgagatcatcctgtcggtgatg
gagcatcatgccaatgtggtgccctggcatttcctgcgcgaacggcagggggtggtgatc
aaatgggtcgatgtggacgccaccggcgcgcttgacccgcaacaggtgatcgacgccatc
ggcccgaagaccaagcttatcgccatcacccatctgtcgaacgtgctgggtacggtcgtc
gatgtgaaaaccatctgtgctgcggcgcgccaacgcggcgtggcggtgctgatcgacgga
tcgcaaagtgcggtgcacatgccggtgaatgtcgaggagatcggctgcgatttctatgcc
atcaccgggcacaagctctacggcccgtcgggctccggcgcgatctggatccgcaaggag
cgcatggacgagatgcggcccttcatgggcggcggcgacatgatccgcgaggttcacaag
gacagcgtcacctatgccgatccgccgatgaagttcgaggccggcacgccgggcatcgtg
cagcagatcggtctgggcgtggcactcgactatctcatggatctcggcatggagaacatc
gccgcgcatgaggccagcgttgccgcttacgccaaggcgcggatggaggggctcaactgg
ctccaggtgcaggggcatgcgccgggaaaggcggcgatcttctccttcacgctggagggc
gcggcgcatgcgcatgacatctcgaccatcctcgacaagaagggcgtcgcggtgcgcgcc
ggccatcactgcgccggcccgctgatggatcacctgggcgtttcggccacctgccgggcc
tcattcggcctctacaataccgagcaagaggtcgatgctttgatcgacgcgctcgaactg
gcgcacgaactttttgcctaa
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