Cutibacterium acnes KPA171202: PPA0921
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Entry
PPA0921 CDS
T00188
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pac
Cutibacterium acnes KPA171202
Pathway
pac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PPA0921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pac03019
]
PPA0921
03400 DNA repair and recombination proteins [BR:
pac03400
]
PPA0921
Enzymes [BR:
pac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPA0921
Messenger RNA biogenesis [BR:
pac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PPA0921
DNA repair and recombination proteins [BR:
pac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PPA0921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
HTH_20
Pribosyltran
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AAT82674
UniProt:
Q6A992
LinkDB
All DBs
Position
complement(1002813..1004963)
Genome browser
AA seq
716 aa
AA seq
DB search
MTTTTDAIPKVDDLRTQGVAILRRLVGRNNADFHPGQWEAIEALVAHHRRALVVQRTGWG
KSAVYFVATLLQRAIGSGPTLIVSPLIALMRDQVAAAKRAGVRAAAISSANATEWSEIAQ
RLDADELDVLLVSPERLVNPTFASKQLPELIKRMGMLVIDEAHCISDWGHDFRPDYRRIR
NLVSALPVTIPVLATTATANSRVVQDVAEQIAPSADDVFILRGPLARKSLRLGVLNLPNP
SERLGWLVQHLSELPKSGIIYCLTVSTAEDTARALTTAGHNVRAYTGRTDAEARTELEEA
LRNNQIKALVATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATDHADILLLPG
PEDPDIWTYFATSSMPTQERANAVLRALAGGQALSISALETRVDIRRSQLGLLLKVMAVD
GSVVKVRDGWQATGKPWVHDTERYERISQARREEQQAMLGYERSRTCRMTLLTGQLDDPS
TTPCGRCDVCAGPWYSVEVDQSAAVRAVQSLNRVGVPVEPRAAWPAGMDALQVALKGRIS
AEEIAAEGRVIARLSDLGWGGALRDLLRSDANGVPIDAEITPALAKACLRVLAEWDWEQR
PAAIVRIPSITRPHLIDSLASGIARVGHLQDLGWLDLADGSARLQSSTNSAYRLRDVHDR
FSVGPGLKSRLSHLGGASVLLIDDVISSRWTMTVAARSLRRAGSGPVLPLALAVTA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaactaccgacgcaataccgaaagtagatgacctacgcacccaaggggtggca
atccttcgtcgtctcgtcggtcgcaacaatgccgatttccaccctggacagtgggaggcc
atagaggctctggttgcccaccaccgtcgagcgctcgtagtccagcgcaccggttgggga
aagtcagcggtttactttgtcgctaccttgttacagcgtgccatcggctcaggcccgacc
ctcatcgtctcgccacttatcgccctcatgcgcgaccaggtcgctgccgcaaagcgagct
ggcgtgcgcgcagcggccatctcatcggccaatgccaccgagtggtccgaaatcgcccaa
cgcctcgacgccgacgaactcgacgttctattagtctcccccgagcgcctggtcaatccc
acattcgccagtaagcagctgcccgagctcataaagcgaatgggcatgttggtcatcgac
gaagcccactgcatctctgactgggggcacgactttcgccccgattaccgacgcatccgt
aacctcgtctccgctctaccggttacgatcccagtacttgcgacaacggcgaccgcaaac
tcacgtgtggtccaagatgtggccgagcagattgcccccagcgccgatgatgtgttcatc
cttcgtgggccgttagcccggaagtcactgcgactcggcgtactcaatctgcccaaccct
tccgaacggctcggttggctcgtccagcacctcagcgaacttcccaagtcgggaattatc
tactgcctgactgtttcgacggccgaggacaccgcgcgtgctctaaccacggccggtcac
aatgtgcgggcttacaccggacgcaccgatgccgaagcaaggaccgaactcgaggaagcc
ttgcgcaataaccagatcaaggccttagtggcgaccagtgccctgggcatgggtttcgac
aaaccggacctcggtttcgtcgtgcacttgggtgcgccgagctctccaatcgcgtactac
cagcaggtaggccgtgccggtcgcgccaccgaccatgccgatatcctgttgcttccgggc
ccggaggatcctgacatttggacttacttcgctacctcctctatgcccacccaagaacga
gccaatgccgtgctcagagcactcgcaggtggccaggcgctctctatctcagctctggag
acgcgggtcgacatcaggcgtagccagttagggctattgcttaaagtgatggccgttgat
ggctcggtcgtgaaggtccgagatgggtggcaagccaccggcaagccgtgggtgcacgac
accgaacggtacgaacgtatctcccaggcacgtcgcgaggaacagcaggccatgctcggc
tacgagcgctcaagaacctgtcgcatgaccttgctcaccgggcagctggacgacccctcc
acgactccttgcggacgctgcgacgtctgtgctggcccgtggtactcagtcgaggtcgat
cagtcagccgctgtgagagccgtccaatccctcaaccgggtgggagttccggtggaacca
cgcgccgcctggcccgcagggatggacgccctccaggttgcgctcaagggtcgcatcagt
gccgaggagatcgctgcagagggccgcgtcatcgccagactctccgatctgggttgggga
ggggcgctgcgcgacctacttcgctccgacgccaatggtgtccctatcgacgctgagatc
accccggcgttggccaaggcgtgcttgcgggtgttggccgagtgggactgggagcagcgt
ccagccgcgatagtgcggatcccgtcgatcactcgcccacacctcattgattccctggcc
tcgggaattgcacgggttggccacctgcaagaccttgggtggttggacctggcggatggg
tccgcacgactacagtcatccacgaactcggcttaccggctccgtgatgtccatgatcgg
ttcagcgtcggaccggggctgaagtctcggttatcccatcttggcggggcatcggtgctg
cttatcgatgacgtcatctctagccgctggacgatgacggtcgctgcacggtcgttgaga
cgagccggatccgggcccgttcttccactagccctcgccgtcacagcctga
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