Cutibacterium acnes KPA171202: PPA1254
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Entry
PPA1254 CDS
T00188
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pac
Cutibacterium acnes KPA171202
Pathway
pac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PPA1254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pac03021
]
PPA1254
03019 Messenger RNA biogenesis [BR:
pac03019
]
PPA1254
Transcription machinery [BR:
pac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PPA1254
Messenger RNA biogenesis [BR:
pac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PPA1254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
AAA_22
AAA_25
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAT83002
UniProt:
Q6A8B3
LinkDB
All DBs
Position
complement(1357490..1359391)
Genome browser
AA seq
633 aa
AA seq
DB search
MTQTSQPDGSLDLSTKLLPELRSIATQMGIKGARGMRKADLIAAISEGGYPGVGRPAERQ
NRGQESGTSSDEGRQQRTQRRRRAEASEDSEFNKSAGGKKTPSVGDLLDAAEAQKQAETA
KKPDDQDPGQQDGGADRPGRERGDRSRRGDSPRRRARNTSRENFNSNSGDSNINDEVGAR
LEALSRGQRGERNQSDRGPQHDHNNDSSVDSDDEYGRFSEYGNGGRRSRRRRQRDRQNRR
KRSNDRYSDSEPNVREDDVLVPCSGILDIRDQYAFVRTSGYLPGANDAYVSMAIVRRHRL
RKGDVIVGQMRAHREGERREKFAPLVKIEQVNGVDPEQMKQRPEFSKLTPLYPQERLRLE
DDPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTMIMQSIANSITRNNPEVHLMVVLVDE
RPEEVTDFQRTVSGEVVASTFDRPADDHTQLSELAIERAKRLVELGHDVVILLDGITRLG
RAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEHGGSLTILATALVETGSKMDEVI
FEEFKGTGNMELRLRREFANKRLFPAIDVDASGTRREELLLSREETAIMWKLRRVLSGLE
GSQALEMMLSRLRKTQTNVEFLYTISKTTPNQD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaaacctcacagccggatggatccttggatctgtccactaagttgctccccgag
cttcgttctatcgctactcagatgggaattaagggagctcgtggtatgcgcaaggctgac
ctcatcgcggctatctctgaagggggatatccgggagtcgggaggccagctgagcgtcag
aatcgcggtcaggaatccggtacttctagtgatgagggccggcaacagcgcacccagcga
cgccgtcgcgcggaggcttctgaggactccgaattcaataaatctgcaggggggaagaaa
actccgtcggtaggcgacctactcgacgccgccgaggctcagaaacaagcggaaacagcc
aagaaacctgacgaccaagatccgggtcagcaggatggcggagctgatcgcccgggccgt
gagcgcggtgaccgcagtcgtcgaggcgattcacctcgacgacgagcccgcaatacctca
cgagaaaatttcaacagcaattctggcgacagcaacatcaacgacgaggttggtgcccgg
cttgaagcgctgtctcgcggtcaacgcggtgaacgcaaccagtccgatcgtggccctcaa
catgatcacaacaacgactcttctgtcgattccgacgacgagtacggtcggttctcggaa
tacggcaatggcgggcgacgttctcgccgccgtcgccagcgtgaccgtcaaaaccgtcgc
aagcgttctaacgaccgctactccgattcagaaccgaatgtgcgtgaggacgacgtcctt
gtcccgtgctcgggcatcctcgacattcgtgaccagtatgcctttgtgcgcacttcggga
tatcttcctggcgccaatgatgcctatgtctcgatggctatagtgcgtcggcaccgcctg
cgcaaaggcgacgtcatcgtcggtcagatgcgtgctcatcgcgaaggggagaggcgtgaa
aagttcgcgccgctggtcaaaatcgagcaggttaatggtgttgatcccgagcagatgaag
cagcgtccggagttttctaagctcactccgctgtatccgcaggaacgtctgcgtctcgag
gacgaccccaaaaacatgactgggcggatcatcgatctcgtcagtccgattggtaaaggc
cagcgcggtctcatcgtttcgcctccaaaggctggcaagacgatgatcatgcaatcgatc
gcaaactcgatcactcgcaataaccccgaagttcacctcatggtggtgttggtcgacgag
cgccccgaggaggtcactgacttccagcgcactgtcagcggcgaggtcgtcgcatcgacc
ttcgaccgccctgctgacgaccatactcagctgtccgagctggccatcgagcgtgccaaa
cgtctcgtagagcttggtcacgacgtcgtcatcttgctggacggcatcactcgtctggga
cgtgcgtacaacttggccgcccctgcttccggtcggatcctttccggtggtgtcgactca
gctgccctgtacccgccgaagaagttctttggcgctgctcgtaatatcgaacacggtggg
tccctgacgatcctcgccaccgctctggttgagaccgggtcgaagatggacgaggtgatc
ttcgaggagttcaaaggcactggcaatatggagttgcggctccgtcgcgaatttgccaat
aagaggctgttccctgctatcgacgttgacgcatccggtacccgtcgcgaggaattgctg
ctgtcgcgcgaggagacagcgattatgtggaagctgcgcagagtgctgtctggtctggaa
ggctcccaggctctcgaaatgatgctttcgcggctgcgtaagacccagacgaacgtggag
ttcttgtacaccatttcgaagacgaccccgaaccaggattga
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