Cutibacterium acnes KPA171202: PPA1467
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Entry
PPA1467 CDS
T00188
Name
(GenBank) metal dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pac
Cutibacterium acnes KPA171202
Pathway
pac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PPA1467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pac03019
]
PPA1467
Messenger RNA biogenesis [BR:
pac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PPA1467
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AAT83215
UniProt:
Q6A7Q0
LinkDB
All DBs
Position
complement(1584036..1585709)
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AA seq
557 aa
AA seq
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MTPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEMLVIDCGVLFPEDDHPGVDLLLPGLD
YLDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLREHRIKGY
KLNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQLPLDGRI
TDLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHV
HRVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYRDNEVVI
ISTGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLTKLGAAV
VHKGNALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVDENNVVL
VEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSVVTVVDT
RSASVVSRPAIQARGFAEGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRRTIGRWV
SRSLRRRPMIVPVVVKI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacacccccggacctgcaaccggacgttttgcgcatcatccccctcggaggcttgggg
gatgttgggcgcaacatgtcgtgctatgaaatcaacggggagatgctcgtcattgactgc
ggggtgctcttcccagaggacgaccatcccggggttgatctactgcttcccgggctggac
tacctcgacgaggagaagctggccaaggtgaaggctctggtgctcacacatggccacgag
gatcatattggtgcggtgccgtacctgcttaaacgtcgccccgatatcccgatctacggc
tctaagctgaccctggcgctggtcgaggcgaaactgcgtgaacaccgcattaagggctac
aaactcaatgttgttcacgagggcgatgtcgctgaggttggcgagcagtttgacctggaa
tttatcgccgttaaccactccattcctgacgctctggcagtgtgtgtgcgcaccgatgcc
ggaactctcattaacaccggcgacttcaagatggaccagcttccgctagacggacgcatc
accgatctgcgtgccttcgcgcgactcggtgaggagggggtcgatctgttcatggttgac
tccacgaatgccgaggttccggggttcgtgaagtccgagactgagatcgagcctgctatc
gagagggtcttcgagaaggcgaaaaagaagcttattgtggcttgcttcgcctcccatgtg
catcgcgtccagcaagtgctcaatatggccgtgcgtcatcaccgcaaggtttgctacgtc
ggtcgttcaatggtccgcaatatggctgttgctcaggacctgggctacctcgacgtgccg
gagaacaccgtcatcgagctgcgcgacctcgaccactaccgagataacgaggtcgtcatc
atctccactgggtcccaaggtgagccactttcggccctagcaaggatcgccaaccgagag
caccgagacatcgaggtgggggagggagataccgttttgctggcatcctctctcatcccg
ggtaatgagaatgccgtctatcgagtgattaatggcctgacgaagcttggcgccgccgtg
gtacataagggcaacgctttggtccacgtttccggccatgccgcagccggagagctgctg
tacgcgtataacatcgtgcggccacgcgctgtgatgccgattcatggtgaggtgcgtcat
cttgtcgctaatgccgatctggccaaagcaaccggtgtcgatgagaacaacgtggtgctt
gtcgaggacggcggggttattgaccttgttgacggagtaccgcgagttgttggcaaggtc
gatgcctcgtacatccttgttgacggatctggggtgggggagcttaccgaggacacgctc
actgatcgccgtatcctcggtgaggagggattcttgtcagtcgtcaccgtggtcgacacc
cgctcggcgtcagtggtgtctcgcccggcgatccaggcgcgtggttttgccgagggcgac
tcggtcttcgcggagatcaccgaccagatcgtcactgagctagagaaggcgatggccggt
ggtatggacgatacccaccggttgcaacaggtggttcgtcggaccattggtcggtgggta
tcgcggtctctgcggcgtcgacctatgatcgtgcctgtcgtcgtcaaaatctga
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