Cutibacterium acnes KPA171202: PPA1727
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Entry
PPA1727 CDS
T00188
Name
(GenBank) putative DNA polymerase III epsilon subunit (exonuclease)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pac
Cutibacterium acnes KPA171202
Pathway
pac03030
DNA replication
pac03430
Mismatch repair
pac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPA1727
03430 Mismatch repair
PPA1727
03440 Homologous recombination
PPA1727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pac03032
]
PPA1727
03400 DNA repair and recombination proteins [BR:
pac03400
]
PPA1727
Enzymes [BR:
pac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPA1727
DNA replication proteins [BR:
pac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPA1727
DNA repair and recombination proteins [BR:
pac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPA1727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Antimicrobial14
Motif
Other DBs
NCBI-ProteinID:
AAT83456
UniProt:
Q6A708
LinkDB
All DBs
Position
1882586..1883296
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AA seq
236 aa
AA seq
DB search
MSQVGTILTPVAFRGQENKRGKAEVHMALQKWPNRGASNATPAGFMSTRRTQRRSFFIPS
PSQIAEPSFVAVDFETANRMGGVSACQVAMVKVCDGQIVDRLNTLIRPPKGWDSFEFTYL
HGISAADVADAPSWTNIADTVSHFVDGVTVYAHNAAFDSRVWRQLDEHFGTTTLPAPFFC
SYRTAQRLIPGLPNYKLPTVLHACAPNYQLNHHRADSDAEACALIVCELQRRAQAS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcaggtgggaactattctgacgccagtcgctttccgaggacaggaaaacaagagg
ggtaaagcggaggtacacatggcgttgcagaaatggcccaaccgaggcgcgagcaacgcc
acaccggcaggcttcatgtcgacccggaggactcagcgtcggtccttcttcatcccctcc
ccctcgcagatcgccgagccgagtttcgtcgcggtggacttcgagacagccaaccgaatg
ggcggagtatcggcctgccaggtggccatggtgaaggtgtgtgacggacagatcgtcgac
aggttgaacaccttaatccgtccgcccaaggggtgggactcctttgagttcacctatctg
catggcatctctgcagccgacgtcgcggacgcccccagctggaccaacattgccgacacc
gtttcccactttgtggatggggtgaccgtatacgcccataacgccgctttcgactcccgg
gtgtggcgacagcttgacgagcacttcggcaccaccaccctgcccgcaccgttcttttgc
tcgtatcggacagcgcagcgcctcatcccggggttacccaactacaagctccccacggtg
cttcacgcttgtgccccgaattaccagctcaaccatcatcgagccgactccgacgccgaa
gcctgcgccctcatcgtctgcgagttacagagacgggcgcaggcaagctga
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