Candidatus Odyssella acanthamoebae: ID47_02320
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Entry
ID47_02320 CDS
T03232
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paca
Candidatus Odyssella acanthamoebae
Pathway
paca03030
DNA replication
paca03410
Base excision repair
paca03420
Nucleotide excision repair
paca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ID47_02320
03410 Base excision repair
ID47_02320
03420 Nucleotide excision repair
ID47_02320
03440 Homologous recombination
ID47_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paca03032
]
ID47_02320
03400 DNA repair and recombination proteins [BR:
paca03400
]
ID47_02320
Enzymes [BR:
paca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ID47_02320
DNA replication proteins [BR:
paca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ID47_02320
DNA repair and recombination proteins [BR:
paca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ID47_02320
NER (nucleotide excision repair)
GGR (global genome repair) factors
ID47_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
phiKZ_IP
Taq-exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AIK95819
UniProt:
A0A077AUV7
LinkDB
All DBs
Position
complement(512776..515460)
Genome browser
AA seq
894 aa
AA seq
DB search
MAKKLILIDGSGFIFRAYHALPPLRRTDGTHVGAVYGFCTMLMKQIEQAQQEASYLAVIF
DAARETFRQEIYPDYKAHRPPVPEDLIPQFSIIREACEAFNVPSIELEGFEADDLIASYA
KSATEQGFSVIIVSSDKDLMQLIGDGIIMLDPIKNKKIAETEVFEKFGVFPNKVIEVQAL
AGDATDNIPGVPGIGIKTAAELINTFGSVEALLERTHEIKQPKRRQSLLENAENARISKK
LVTLCDSAPLPAEIKTMIPRDPDAIHLKDFMRYQGFTSLIARIDKQLSIDKPAAVTTTYI
TIRTADQLKSLVQDCLSKPYVAFDTETTSLNIMDAKLVGISLSHTAGYGYYIPLNHQEAT
QQLDEKTAFDLLQPLLTDPAILKVGQNIKYDLGVLHKYGVEVTPITDTMLISYVLDGSRH
RHGMDELAERHLQHTTIKYNDVVGTGKNQKTFDMVDIGLATTYAAEDADITLRLYEHLQP
RLAQEKMTTVYERIERPLIPIIADMELTGVRANQQLLFRLGQEFTEEMQRLERRIYELAG
RAFNVGSPKQLGEILFDELKLPVPKKTKTGSYITDADVLEKLVENGYELPKVVLDWRELA
KLKSTYVDGLLNSINKKTQRIHTSYSMALTSTGRLSSSEPNLQNIPIRTARGRQIRQAFI
PQTDWKMVSLDYSQIELRLLCHMAEVPQLSQAFCQGQDIHVTTASEMFGVPMDQITGDLR
RKAKAINFGIIYGISAFGLAQQLDIPQSEAARYIAHYFEKYPGIQAYMEYQKEFARQHGY
VKTLFGRKCYILGIQDKNGAVRQAAERQAINAPLQGTNADIIKMAMHRIPQVLKDHNLGG
RMLLQVHDELIFEIPESQVEETSKLIKNVMESIAYLRVPLVVGVGVGNNWDEAH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaactaattttaattgatggttcaggctttatttttcgagcctatcatgct
cttcccccccttcgtcgtactgatgggactcatgttggtgcggtttatggtttttgcacc
atgttgatgaaacagattgagcaagcacaacaagaagcaagctatcttgctgttattttc
gatgcggctcgggaaacttttcgtcaagagatttacccggattataaagcccatcgcccg
cctgttcctgaagatttaatcccacaattcagcatcatcagagaagcttgcgaagccttt
aatgttccctccattgaattagaaggttttgaagccgatgatttgattgcaagttatgca
aaatccgccaccgagcaaggattttctgtcattattgtttcatccgataaagatttaatg
caacttattggcgacggcattatcatgcttgaccctattaagaataaaaaaattgctgaa
acagaagtttttgaaaaatttggcgtcttccctaataaagtcattgaagttcaagcgtta
gcgggcgacgctactgataatatccctggtgttccgggtatagggatcaaaacggcggcg
gagctcattaatacattcggcagcgtagaagctctgcttgagcgaacccatgaaattaag
cagccgaaacgtcgtcaaagtttactggaaaatgctgagaatgctcgcatttccaaaaag
cttgtcactttatgtgattctgcaccgctaccagcggaaattaagacaatgattcctcga
gatccagacgcaattcatctaaaagatttcatgcgataccaaggatttacgagcctgatt
gcccgcattgacaaacaactctctattgataagccagctgctgtcacgacaacctatata
acaattcgcacggcagatcagttaaaatcccttgtgcaagactgcttaagcaagccctat
gttgcttttgatactgagaccacctccctcaatattatggatgctaaacttgtgggcata
tctttatctcataccgctggctacggttattatatccccttgaatcatcaggaagcgact
caacaacttgatgagaaaacagcgtttgatttattgcaaccccttctaacggatcctgct
attttgaaggtgggacagaacattaaatatgatctgggtgtattgcataaatatggggta
gaggttacccccatcacggacaccatgctaatttcctatgttttagatggtagccgccac
cgccatggaatggatgagcttgcggaacgccacctacaacacacgaccatcaaatataat
gatgtagtgggaacgggaaagaatcaaaagacatttgatatggtcgacatcggtcttgcg
acaacttatgcagccgaagatgcggatatcacccttcgattatatgaacacctacagccg
cgcctagcacaagaaaaaatgacaactgtttatgaacgcattgaacgccctctcattccc
attattgctgatatggaattgaccggcgtccgggctaatcaacaactattgtttagatta
ggtcaagaatttaccgaagaaatgcaacgcttagaacggcgtatctatgaattggcgggc
cgcgcttttaatgtaggatcgccaaagcaacttggtgaaattttgtttgatgaactaaaa
ctaccagtgcccaaaaaaacaaaaacggggagctatatcacggatgctgatgttttagaa
aagctcgttgaaaatggctatgaattaccgaaagttgtgttagactggcgcgaacttgcc
aagctgaaatcaacctatgtggatggccttctaaacagtatcaataaaaaaacccaacgc
attcatacttcctattccatggccttaacgtcgacaggtcgtctttcctcttcggagcca
aatttacagaatattcccattcgaacagcgcggggtcgacaaattcgccaagcctttatt
ccgcaaacagattggaaaatggtatccttggactattcacaaattgaattacgattgctg
tgtcatatggctgaagtaccccaattatctcaagccttttgccaaggacaggatattcat
gtgacaacagcatccgaaatgtttggtgtcccgatggatcaaattacaggggatttgcgc
cgcaaagccaaggctatcaactttggtattatttatggaattagtgcttttggtctggct
caacagcttgatattccacaatctgaagcagcgcgttatattgcgcattatttcgagaaa
tatcccggcatccaagcttatatggagtatcaaaaagaatttgcccgccaacatggatat
gtcaaaaccctatttgggcgtaaatgttatatcttagggattcaagataagaatggggcc
gtacgccaagcggctgaacgtcaagcaattaacgccccgctgcagggcaccaatgctgac
attattaagatggcgatgcatcgcattccgcaagtcttaaaagatcataatttagggggg
cgcatgttattgcaagtccatgatgaattgatctttgaaattccagaatcccaagttgag
gaaacatcaaaactcattaagaacgtgatggaaagtattgcttatttacgcgtccccttg
gtggtcggcgtgggagtgggcaataactgggacgaagcccattaa
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