Candidatus Odyssella acanthamoebae: ID47_03145
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Entry
ID47_03145 CDS
T03232
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
paca
Candidatus Odyssella acanthamoebae
Brite
KEGG Orthology (KO) [BR:
paca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paca01002
]
ID47_03145
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paca01011
]
ID47_03145
Peptidases and inhibitors [BR:
paca01002
]
Cysteine peptidases
Family C82
ID47_03145
Peptidoglycan biosynthesis and degradation proteins [BR:
paca01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ID47_03145
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIK95949
UniProt:
A0A077AV92
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Position
661174..662850
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AA seq
558 aa
AA seq
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MYFKDNPCLDTIVMKVFTITALITTALSYNPALADKAHDSSQKGYTKVVVGEHKSPIELY
ILDHKTISKETRDFYKQHGYVAVWYPNGEESVAAKAAKTVLRGADLEGLNPNDYQQGWTA
NYKEEWVTAEVQLTDTFLKFIDHVRVGRIPAKDAARTIKLTSPKTDPVGLLTLALKDSSN
NFETLTRMAPAVPNYQNLKKLLQIFKGLSAKWGDLPLLRKTKVTVGQTDPNIPAVKKILA
VYGYYVSANFDDLYTQDLFNALVDFQRHNNLEADGVMGDDTTRALNIPLTKRVQQIIINM
ERLRWFPDDMGEKHLIVNVGGYEVLAVHNNKIEVRMRAIVGQVGRKTPLFYAPLINIVIN
PSWGVPKSILVRDKIPKIINDPSYVERAGFTVYDNAGNRLDPYHIDWEHRGSSLNLRQKP
GFQNALGRIKLNIDNPYTIYLHGTPTANLFDKPRRNFSSGCIRLQNPNELSAWVLKDENG
WDEHRIQKEINSGQTKTVSLKTPMPVYFTYQTAWLSDDGKPHFSPDAYKMDETLISLLKL
EDYPLTQIAKSNDQLVYG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtattttaaggataacccttgtctggataccatcgtcatgaaagtttttacgattaca
gccttaattaccacggctttatcttataatccagcactggcagataaagcacatgactct
tcccaaaagggttataccaaagttgtcgtcggtgaacataagagccctatcgaattatat
attctcgaccataagactattagtaaagaaacgcgggacttctataagcaacatggttat
gttgctgtttggtatcccaacggcgaagaaagtgtcgctgccaaggcagcaaaaacggtt
ttaagaggtgccgatctcgaggggctcaatcccaatgattatcaacaagggtggaccgca
aactataaagaagagtgggttacagccgaagtccaattaacagatacatttttgaaattt
atcgatcatgtacgcgtggggcgtatacccgccaaagatgccgctcggacaataaaactt
acctctcccaaaacagatcctgtgggccttctcaccctcgccttaaaagattcaagcaat
aattttgaaacactcactcggatggcaccggctgtaccgaattatcaaaacctaaaaaag
ctattacaaatttttaaaggcttatcagctaaatggggggacctcccccttcttagaaaa
accaaagttacggtgggacaaactgatcccaacattccagcagtcaaaaaaattctggcc
gtttatggttattatgtctcagcaaattttgacgatctttatactcaagatttgtttaat
gccctggttgattttcaacgacataacaatttagaggccgatggggttatgggcgatgat
accacgcgcgccttaaatatccccttaaccaagcgggttcaacaaattatcatcaatatg
gaaaggttacgctggttccccgatgacatgggtgaaaagcatcttattgtcaatgttggt
ggatacgaagttctagctgtccataataataaaatagaagtccggatgcgcgccattgtt
ggccaagttggccgcaagaccccgctattttatgcgccccttataaatattgtcatcaat
ccatcttggggagttcccaaaagcatccttgttcgggataaaatccctaagatcatcaat
gatccaagctatgtcgaacgagcaggctttactgtctatgacaatgctggcaaccgtctt
gacccctatcatattgattgggagcatcgaggctcaagtctaaacttacgtcaaaagccg
ggcttccagaatgctttgggacgaataaagttgaacattgacaatccctataccatttat
ttgcacggaacacccacagctaacctctttgataagccacgtcgaaatttctcctccggt
tgcatccggttacaaaatcctaatgagctgtccgcttgggttttaaaggatgaaaatggt
tgggatgagcatagaattcaaaaggaaattaattctggtcaaactaaaactgtttcactg
aaaacccccatgcccgtttactttacataccaaactgcatggctttctgatgatggcaaa
cctcatttcagtccggatgcctataaaatggatgagacgctgataagcctattaaagctt
gaagactatccccttacacaaattgctaaaagtaacgatcagcttgtatatggatga
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